Query= MSMg01no434_j12.b1 MSMg01no434_j12.b1 CHROMAT_FILE:
MSMg01no434_j12.b1 PHD_FILE: MSMg01no434_j12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:03 2005
(451 letters)
>mm_chr18_69555235_69556083
Length = 849
Score = 754 bits (390), Expect = 0.0
Identities = 430/444 (96%), Gaps = 2/444 (0%)
Strand = Plus / Plus
Query: 7 gaattcattgtagtttcctgcacttttcctacattgaccatttaaggaagagccttgtat 66
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcattgtaggctgctgcacttttcctacattgaccatttaaggaagagccttgtat 266
Query: 67 cttcaggtactgatgtccctggaagggttttactaagttttaacctctgtgatggctgta 126
||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 267 cttcacgtactgatgtccctggaagggttttacttagttttaacctctgtgatggctgta 326
Query: 127 agtgtggagactattcttagccgatccatggctgcccctcatggtgtacagcctcactgg 186
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 327 agtgtggagactattcttagccgatccatggctgcccctcatggcgtacagcctcactgg 386
Query: 187 gacttctaaccacagagcggtggtgaatgaagctcgggttttcctcacctgggttgtgag 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gacttctaaccacagagcggtggtgaatgaagctcgggttttcctcacctgggttgtgag 446
Query: 247 gataagatttcttcatgtttggtgcccaggcactctttatgggctttactcatccttttt 306
||||||||||||||||||||||||||||||||| | || ||||||||||||| ||||||
Sbjct: 447 gataagatttcttcatgtttggtgcccaggcacacagtaggggctttactcattcttttt 506
Query: 307 catttactagattatcattttgtttacatgcttacagatccaagtggaatgtaaataaca 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 catttactagattatcattttgtttacatgcttacagatccaagtggaatgtaaataaca 566
Query: 367 tggcgatgttttaaaaaaaaaatgacacactggatagatttcctagtcttgaaaaggaag 426
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tggcgatgttttaaaaaaaa--tgacacactggatagatttcctagtcttgaaaaggaag 624
Query: 427 tttgtacatgggagtctgaacttc 450
||||||| ||||||||||||||||
Sbjct: 625 tttgtacgtgggagtctgaacttc 648
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 849
Length adjustment: 10
Effective length of query: 441
Effective length of database: 839
Effective search space: 369999
Effective search space used: 369999
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no434_j12.g1 MSMg01no434_j12.g1 CHROMAT_FILE:
MSMg01no434_j12.g1 PHD_FILE: MSMg01no434_j12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:03 2005
(249 letters)
>mm_chr18_69738379_69739029
Length = 651
Score = 458 bits (237), Expect = e-133
Identities = 247/251 (98%), Gaps = 2/251 (0%)
Strand = Plus / Minus
Query: 1 agagttggtcaacaagtcctcatatttaaaacagatttctcaaaatgcatcccatgcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 agagttggtcaacaagtcctcatatttaaaacagatttctcaaaatgcatcccatgcctt 392
Query: 61 tgctgcatctattctttatacaactgaagcaatgtcattggcctgggccttaatttccct 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 391 tgctgcatctattctttatacaacggaagcaatgtcattggcctgggccttaatttccct 332
Query: 121 tggcctctaatggtagtgcccaaatgaattaacattttccagattttcaaactaaattga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tggcctctaatggtagtgcccaaatgaattaacattttccagattttcaaactaaattga 272
Query: 181 aagttaattttgaaatatatata--ctccaaattataaaccagaatagctcaggagtctt 238
||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 271 aagttaattttaaaatatatatatactccaaattataaaccagaatagctcaggagtctt 212
Query: 239 gaacaagattg 249
|||||||||||
Sbjct: 211 gaacaagattg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 651
Length adjustment: 9
Effective length of query: 240
Effective length of database: 642
Effective search space: 154080
Effective search space used: 154080
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
