Query= MSMg01no436_a21.b1 MSMg01no436_a21.b1 CHROMAT_FILE:
MSMg01no436_a21.b1 PHD_FILE: MSMg01no436_a21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:01 2005
(589 letters)
>mm_chr18_75698724_75699708
Length = 985
Score = 1044 bits (540), Expect = 0.0
Identities = 576/590 (97%), Gaps = 6/590 (1%)
Strand = Plus / Minus
Query: 1 ttactttgcctggtctcttctaggctagaccagtagtgacttttctaggctaagcagact 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 785 ttactttgcctggtctcttctaggctagaccagtagtgactcttctaggctaagcagact 726
Query: 61 cccttatagttccccccagaaagttgtgaccagtccactcttcctttgaggcctccctct 120
||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 725 cccttatagttccccccaggaagttgtgaccagcccactcttcctttgaggcctccctct 666
Query: 121 tatctttagagtcctctgcccatttattggggtcttccttatgggggtaaatagcaagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 665 tatctttagagtcctctgcccatttattggggtcttccttatgggggtaaacagcaagtt 606
Query: 181 gaggtcccatccagctagaggttgccaggtgatgctattcca-caaagccacttgggaaa 239
|||||| ||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 605 gaggtc----ccagctagaggttgccaggtgatgctatt-cagcaaagccacttgggaaa 551
Query: 240 atgagtccatattactctgtcctgtgagcctggatcaaccccaaagtgggagcagccaac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 atgagtccatattactctgtcctgtgagcctggatcaaccccaaagtgggagcagccaac 491
Query: 300 aggggcccacattaggcccactggaaaacagaccacaggtcccaactccatggttcccag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 aggggcccacattaggcccactggaaaacagaccacaggtcccaactccatggttcccag 431
Query: 360 ggtgatgggagccctgcaccagtccctttggaagtatatgaggatccaggaagtggtcag 419
||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 430 ggtgatgggggccctgcaccagtccctttggaagtatatgaggacccaggaagtggtcag 371
Query: 420 gagaggaagcacaatgcctcttacaggcttcaacgtgggccaagcagtcaaagaatgtat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 370 gagaggaagcacaatgcctcttacaggcttcaacgtgggccaagcagtcaaagaacgtat 311
Query: 480 ggtctagttacaaaacagaaagtaagatatactgaaaagcctgtataataacaatatagc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ggtctagttacaaaacagaaagtaagatatactgaaaagcctgtataataacaatatagc 251
Query: 540 tatgtatgtgcttggatgtacacacttgtaaataagcatgggtgtgcata 589
|||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 250 tatgtatgtgcttgtatgtacacacttgtaaataagcatgggtgtgcata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 985
Length adjustment: 10
Effective length of query: 579
Effective length of database: 975
Effective search space: 564525
Effective search space used: 564525
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no436_a21.g1 MSMg01no436_a21.g1 CHROMAT_FILE:
MSMg01no436_a21.g1 PHD_FILE: MSMg01no436_a21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:01 2005
(145 letters)
>mm_chr18_75582136_75582680
Length = 545
Score = 281 bits (145), Expect = 2e-80
Identities = 145/145 (100%)
Strand = Plus / Plus
Query: 1 cttctcacaaacaaaaggggtgtctagagaaagccagccagagcaaggctttaaggagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttctcacaaacaaaaggggtgtctagagaaagccagccagagcaaggctttaaggagca 260
Query: 61 gtacccaggcacacggccacgtagtcccagaggacatacatgaagctcctgctcttaacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtacccaggcacacggccacgtagtcccagaggacatacatgaagctcctgctcttaacc 320
Query: 121 cccctgttatgaccaccagcagtaa 145
|||||||||||||||||||||||||
Sbjct: 321 cccctgttatgaccaccagcagtaa 345
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 145
Length of database: 545
Length adjustment: 8
Effective length of query: 137
Effective length of database: 537
Effective search space: 73569
Effective search space used: 73569
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
