Query= MSMg01no436_h17.b1 MSMg01no436_h17.b1 CHROMAT_FILE:
MSMg01no436_h17.b1 PHD_FILE: MSMg01no436_h17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:33 2005
(460 letters)
>mm_chr18_9965542_9966400
Length = 859
Score = 586 bits (303), Expect = e-171
Identities = 327/335 (97%), Gaps = 1/335 (0%)
Strand = Plus / Minus
Query: 126 agatggaccataagcacatggtcaggagaaacagcaaatatgagatataccgttggggag 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 agatggaccataagcacatggtcaggagaaacagcaaatatgagatataccgttggggag 800
Query: 186 attgccaggccagcagttaggatattagagattaacccccacacccccaacagtaactgt 245
|||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 799 attgccaggccagcagataggagattagggattaacccccacacccccaacagtaactgt 740
Query: 246 caaacccaagtaaaataaccatagtatgaacctcatttatttgtaagctagtcaggataa 305
||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 739 caaacccaaataaaataaccatagtatgaatctcatttatttgtaagctagtcaggataa 680
Query: 306 gcataaagttgtcgtactactgatacagtcaaagaacagatgataaataattggagatgc 365
||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 679 gcataaagttgtcgtactactgatacagtcaaagaacagatcatatataattggagatgc 620
Query: 366 aaaataaaaaaaaaaaggcatttataaaatgtaaagttgtcatcaccacaacttttagaa 425
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 aaaat-aaaaaaaaaaggcatttataaaatgtaaagttgtcatcaccacaacttttagaa 561
Query: 426 gtggtaaaaggcatgaatccaaatttaaaatgtca 460
|||||||||||||||||||||||||||||||||||
Sbjct: 560 gtggtaaaaggcatgaatccaaatttaaaatgtca 526
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 859
Length adjustment: 10
Effective length of query: 450
Effective length of database: 849
Effective search space: 382050
Effective search space used: 382050
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no436_h17.g1 MSMg01no436_h17.g1 CHROMAT_FILE:
MSMg01no436_h17.g1 PHD_FILE: MSMg01no436_h17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:34 2005
(476 letters)
>mm_chr18_9785195_9786070
Length = 876
Score = 913 bits (472), Expect = 0.0
Identities = 475/476 (99%)
Strand = Plus / Plus
Query: 1 tgtactgctaatttccattgctctactatcttgtatgtagacacaggaatgatgtccttg 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 tgtactgctaatttccattgctctactatcttgtatgtagacacaggaacgatgtccttg 260
Query: 61 catcactattttgtttgtgctccatttttataaaagtggtttctcctaaacaaacaaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catcactattttgtttgtgctccatttttataaaagtggtttctcctaaacaaacaaagc 320
Query: 121 cacaggaactggttcagttgaagagaataaacagatttcaagggatcaaaggccattgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacaggaactggttcagttgaagagaataaacagatttcaagggatcaaaggccattgtg 380
Query: 181 gaagttcatggagcaatcttttcctcactagatcacactcacatgttgatggtgtcatag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaagttcatggagcaatcttttcctcactagatcacactcacatgttgatggtgtcatag 440
Query: 241 ttgaagatgaaagcatcagggattctattttatgcttcattttctgatgattttagtgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgaagatgaaagcatcagggattctattttatgcttcattttctgatgattttagtgat 500
Query: 301 cttaattttgccttcaaaattaaattaaacaaatcaggaatacaaaaggaagatgtcttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttaattttgccttcaaaattaaattaaacaaatcaggaatacaaaaggaagatgtcttg 560
Query: 361 gcttggatgttggaggtcatccagttcccaagcagccaaagaaaacctctcccaacttct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcttggatgttggaggtcatccagttcccaagcagccaaagaaaacctctcccaacttct 620
Query: 421 tttctaatgactccggtacatgagaacaaacaggcagcccccatccatattcactt 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttctaatgactccggtacatgagaacaaacaggcagcccccatccatattcactt 676
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
