Query= MSMg01no436_p06.b1 MSMg01no436_p06.b1 CHROMAT_FILE:
MSMg01no436_p06.b1 PHD_FILE: MSMg01no436_p06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:10 2005
(579 letters)
>mm_chr18_37786038_37787015
Length = 978
Score = 1081 bits (559), Expect = 0.0
Identities = 571/575 (99%), Gaps = 1/575 (0%)
Strand = Plus / Plus
Query: 5 gaattcctttttatggcatagaaaccacttagggttttttaactctgcatccagagacta 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctttttatggtatagaaaccacttagggttttttaactctgcatccagagacta 264
Query: 65 gggaaagggaaaagtgtatctttacataatcaataactttggtaggtctcatgttgaacc 124
|| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggaaaagggaaaagtggatctttacataatcaataactttggtaggtctcatgttgaacc 324
Query: 125 gtgggaagagattgaggcataaaattaaggtctggaatccttaaataaataaataggcag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtgggaagagattgaggcataaaattaaggtctggaatccttaaataaataaataggcag 384
Query: 185 ccaatagatggtataatgtaaaccaaccaaggaaagaaaggtaatcttaggcagtcccca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccaatagatggtataatgtaaaccaaccaaggaaagaaaggtaatcttaggcagtcccca 444
Query: 245 aagtaagtgatttctgagatccttttgacagcatggacagtgaaattggttccatttctg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aagtaagtgatttctgagatccttttgacagcatggacagtgaaattggttccatttctg 504
Query: 305 gtaaatggtgataatttggccaggagcatagtcctttaaggataccctcaaaataaccta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtaaatggtgataatttggccaggagcatagtcctttaaggataccctcaaaataaccta 564
Query: 365 aagaccattcaggagcttggtgtaaactgaaagtggacagcttgattatttccaaaactt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aagaccattcaggagcttggtgtaaactgaaagtggacagcttgattatttccaaaactt 624
Query: 425 tgcattaaacatcctgacacaggacaaatggagttcttgccagtagcattggtagccatc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgcattaaacatcctgacacaggacaaatggagttcttgccagtagcattggtagccatc 684
Query: 485 agcaggacaaaagcaaggagcctggctcctatggaggaatgtgctggtcccaaagctgtt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agcaggacaaaagcaaggagcctggctcctatggaggaatgtgctggtcccaaagctgtt 744
Query: 545 tcatacagcaggaaaaagagtcctagcctttaact 579
|||||||||||||||| ||||||||||||||||||
Sbjct: 745 tcatacagcaggaaaa-gagtcctagcctttaact 778
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 978
Length adjustment: 10
Effective length of query: 569
Effective length of database: 968
Effective search space: 550792
Effective search space used: 550792
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no436_p06.g1 MSMg01no436_p06.g1 CHROMAT_FILE:
MSMg01no436_p06.g1 PHD_FILE: MSMg01no436_p06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:10 2005
(451 letters)
>mm_chr18_37887336_37888186
Length = 851
Score = 833 bits (431), Expect = 0.0
Identities = 446/451 (98%)
Strand = Plus / Minus
Query: 1 atagaatggaacttaccggagcgcaagcatcttcatccttattctcatggaaatctatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 atagaatggaacttaccggagcgcaagcatcttcatccttattctcatggaaatctatgg 592
Query: 61 atgttaataaggaatcatttttctcacagctttcttggttaatgagcatgtctgcatagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 atgttaataaggaatcatttttctcacagctttcttggttaatgagcatgtctgcatagt 532
Query: 121 tgggctgaggaaagataatgtggcttgtctgggagcctgaagtgagtgagacttcatgag 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 tgggctgcggaaagataatgtggcttgtctgggagcctgaagtgagtgagacttcatgag 472
Query: 181 aatagctttgtagaaaagcttgtaccccatcaatgcccacaaaatgtgatggaggtgcag 240
||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 471 aataggtttgtagaaaagcttgtaccccgtcaatgcccacaaaatgtgatggaggtgcag 412
Query: 241 gggccaatccacttctggagccctggagctggcgagacttctgccagcgctgaagtctga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gggccaatccacttctggagccctggagctggcgagacttctgccagcgctgaagtctga 352
Query: 301 gagctaggaggacaatgacaaagacaaggaagacacaggagaccacagccactgccacca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 gagctaggaggacaatgacaaagacaaggaagacacaggagaccacagccactgccacca 292
Query: 361 ccaggtggagcgtgagatcagaatcctctggtagctcaggggtcataatgctgctcaagt 420
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 291 ccaggtggagcgtgagatcagaatcctctggtacctcaggggtcataatgctgctcaagt 232
Query: 421 cagccagcacttcagggatgctgttagccac 451
|||||| ||||||||||||||||||||||||
Sbjct: 231 cagccaacacttcagggatgctgttagccac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
