Query= MSMg01no437_o22.b1 MSMg01no437_o22.b1 CHROMAT_FILE:
MSMg01no437_o22.b1 PHD_FILE: MSMg01no437_o22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:30 2005
(351 letters)
>mm_chr18_80837716_80838466
Length = 751
Score = 598 bits (309), Expect = e-175
Identities = 339/349 (97%), Gaps = 2/349 (0%)
Strand = Plus / Minus
Query: 4 ggaattcccccagtaatccttctgtgtgcatacacttatagcccagccccagtacagcct 63
||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 551 ggaattcccccag-gatccttctgtgtgcataaacttatagcccagccccagtacagcct 493
Query: 64 cagcacagacttaatccttagccacacactggagtgggcctcaaatcggaaccgcagaga 123
|||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||
Sbjct: 492 cagcacagacttaatccttagccacacactggagagggcctcaaatcagaaccacagaga 433
Query: 124 ccctggctctcacctggaccttgtgcacagcaggcagcctttggagagtgtctataagcc 183
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 432 ccctggctctcacctggaccttgtgcacagcaggcagcctttggagagtgcctataagcc 373
Query: 184 attttagaagcatagtttcccagaaagagcttcccacctaacctggaaggacaag-ccca 242
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 372 attttagaagtatagtttcccagaaagagcttcccacctaacctggaaggacaagcccca 313
Query: 243 gagatggaactctgtgaggcccaagagaggagcgtcagccaagcacaacctgcccagtgg 302
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 312 gagatggaactctgtgaggcccaggagaggagcgtcagccaagcacaacctgcccagtgg 253
Query: 303 ctcacagatgaatggcctcattgggaggcatcctcacctggtgttggca 351
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ctcacagatgaatggcctcattgggaggcatcctcacctggtgttggca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 351
Length of database: 751
Length adjustment: 9
Effective length of query: 342
Effective length of database: 742
Effective search space: 253764
Effective search space used: 253764
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no437_o22.g1 MSMg01no437_o22.g1 CHROMAT_FILE:
MSMg01no437_o22.g1 PHD_FILE: MSMg01no437_o22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:30 2005
(339 letters)
>mm_chr18_80687919_80688657
Length = 739
Score = 656 bits (339), Expect = 0.0
Identities = 339/339 (100%)
Strand = Plus / Plus
Query: 1 tctttctggaaataagtagcaactagtatctaatgaggtgtttgggactctctcacccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctttctggaaataagtagcaactagtatctaatgaggtgtttgggactctctcacccct 260
Query: 61 gagggagggatcatttgctgctctcaggcctcagaagcaggcggcctttgatttacttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagggagggatcatttgctgctctcaggcctcagaagcaggcggcctttgatttacttca 320
Query: 121 tgccatcagataagcaaagggaaggtcggccccaggacgagagggaacttcatcatgcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgccatcagataagcaaagggaaggtcggccccaggacgagagggaacttcatcatgcag 380
Query: 181 ataatgaaatcaggaagcagctctttatggaattagggacctgtgcatgtgagctaggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ataatgaaatcaggaagcagctctttatggaattagggacctgtgcatgtgagctaggag 440
Query: 241 ttatgggtgtcactgggggctcagtgggagcgagggggaagagattcaggatctttgggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttatgggtgtcactgggggctcagtgggagcgagggggaagagattcaggatctttgggc 500
Query: 301 cacatagccattcgtgagacttagctagcttctctgaaa 339
|||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cacatagccattcgtgagacttagctagcttctctgaaa 539
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space: 240900
Effective search space used: 240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
