Query= MSMg01no438_a23.b1 MSMg01no438_a23.b1 CHROMAT_FILE:
MSMg01no438_a23.b1 PHD_FILE: MSMg01no438_a23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:41 2005
(668 letters)
>mm_chr18_3844966_3846033
Length = 1068
Score = 1259 bits (651), Expect = 0.0
Identities = 663/667 (99%)
Strand = Plus / Plus
Query: 1 ttgtcttcagtaatattctttgctttgaaatctgctttatctgacagtaatatagctact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgtcttcagtaatattctttgctttgaaatctgctttatctgacagtaatatagctact 260
Query: 61 ctgatttaaaatcagcacaggctgacacatccttatttatccctttactgtctactcaca 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgatttaaaatcagcacaggctgacacatccttatttatccctttactgtctactcacc 320
Query: 121 tgtgtggttccctttgaagtatgcttttctaaagagcatgtagttgttctaattttatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtgtggttccctttgaagtatgcttttctaaagagcatgtagttgttctaattttatct 380
Query: 181 tttcagaactggtaatctgatccaaagcctagtgcatgatagacaaatcctctactaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 tttcagaactggtaatctgatccaaagcctagtgcatgatagacaaatcgtctactaggg 440
Query: 241 atttgatggtttttaaaatatacctttccaatgatgcttcctgtttttgtctccatcttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atttgatggtttttaaaatatacctttccaatgatgcttcctgtttttgtctccatcttc 500
Query: 301 ttcccactacctcccctctccagagtctcacttaaagatcagtctagccttgaactcaca 360
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttcccgctacctcccctctccagagtctcacttaaagatcagtctagccttgaactcaca 560
Query: 361 atcctcattccttagtctcctaaattgctgagattataagtgtaaaccatcatgcctaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atcctcattccttagtctcctaaattgctgagattataagtgtaaaccatcatgcctaca 620
Query: 421 ctaccttttagtttgtgtattttgaagatttacagaaaagtaattattggtacattagaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctaccttttagtttgtgtattttgaagatttacagaaaagtaattattggtacattagaa 680
Query: 481 cttagatttgccattttgtttctttatgctcctttttaatttttttctgcttcatcaacc 540
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 681 cttagatttgccattttgtttctttatgctcatttttaatttttttctgcttcatcaacc 740
Query: 541 cctttttattttctatggaccacttgaacagtttttgaattctactttggtttattcatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cctttttattttctatggaccacttgaacagtttttgaattctactttggtttattcatc 800
Query: 601 ctatcttttgagtatttcagatgtctcactgcatgaagaacttgcttccatttagacacc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ctatcttttgagtatttcagatgtctcactgcatgaagaacttgcttccatttagacacc 860
Query: 661 tccattc 667
|||||||
Sbjct: 861 tccattc 867
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space: 696164
Effective search space used: 696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no438_a23.g1 MSMg01no438_a23.g1 CHROMAT_FILE:
MSMg01no438_a23.g1 PHD_FILE: MSMg01no438_a23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:41 2005
(276 letters)
>mm_chr18_3983568_3984243
Length = 676
Score = 534 bits (276), Expect = e-156
Identities = 276/276 (100%)
Strand = Plus / Minus
Query: 1 atccaaggcagctttgctatgtgatacttgtgtgacccagggatctatctgggaggggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 atccaaggcagctttgctatgtgatacttgtgtgacccagggatctatctgggaggggca 364
Query: 61 tctctcctcagtacagccttggccagttctccttgtgatcaatcctgccctccaggttac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tctctcctcagtacagccttggccagttctccttgtgatcaatcctgccctccaggttac 304
Query: 121 ccactcccctcactggctgagacttagccaatgccagggtcatcatgccagggacattgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ccactcccctcactggctgagacttagccaatgccagggtcatcatgccagggacattgg 244
Query: 181 ggtgtgagtattccttggggcacaggctttgtatggaacactcaggaagggaagttgagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ggtgtgagtattccttggggcacaggctttgtatggaacactcaggaagggaagttgagg 184
Query: 241 gcaggaatgggagaggggggaaaagaggaagggagg 276
||||||||||||||||||||||||||||||||||||
Sbjct: 183 gcaggaatgggagaggggggaaaagaggaagggagg 148
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 276
Length of database: 676
Length adjustment: 9
Effective length of query: 267
Effective length of database: 667
Effective search space: 178089
Effective search space used: 178089
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
