Query= MSMg01no439_c05.b1 MSMg01no439_c05.b1 CHROMAT_FILE:
MSMg01no439_c05.b1 PHD_FILE: MSMg01no439_c05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:10 2005
(444 letters)
>mm_chr18_81936274_81937117
Length = 844
Score = 692 bits (358), Expect = 0.0
Identities = 382/390 (97%), Gaps = 2/390 (0%)
Strand = Plus / Minus
Query: 6 aattcatttttataccctttcttataaagattggcaaataagt-aaaaaaaaaatctcat 64
|||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 568 aattcatttttataaactttcttataaagattggcaaataagtaaaaaaaaaaatctcat 509
Query: 65 aaccaaattaacttgccccaaagtctctgtaatacaatgaacttctatatagttagcata 124
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 aaccaaattaactagccccaaagtctctgtaatacaatgaacttctatatagttagcata 449
Query: 125 aaaacataggatggaagctatggatcttcatgttgcattttacaatttttaggattacac 184
||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||
Sbjct: 448 aaaacataggatggaagctgtggatcttcacgttgcattttac-atttttaggattacac 390
Query: 185 atactttatccaccagcaaagtgcaaagcccatgacagaactggaactagacaattagct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 atactttatccaccagcaaagtgcaaagcccatgacagaactggaactagacaattagct 330
Query: 245 ttatatcttctttcataattcatgtctgttaactgtattcaatccttcattatcccctta 304
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 329 ttatatcttctttcataattcatgtctgttagctgtattcaatccttcattatcccctta 270
Query: 305 tatttagcatttcttgttttttttcacatttgaattatacatattcctacatgtacattc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tatttagcatttcttgttttttttcacatttgaattatacatattcctacatgtacattc 210
Query: 365 atttacacacacacacacacacacacacac 394
||||||||||||||||||||||||||||||
Sbjct: 209 atttacacacacacacacacacacacacac 180
Score = 56.8 bits (29), Expect = 3e-12
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 404 cgtgtgtgtgtgtgtgtgtgtgtgtgtgt 432
|||||||||||||||||||||||||||||
Sbjct: 177 cgtgtgtgtgtgtgtgtgtgtgtgtgtgt 205
Score = 54.9 bits (28), Expect = 1e-11
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 407 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 434
||||||||||||||||||||||||||||
Sbjct: 178 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 205
Score = 54.9 bits (28), Expect = 1e-11
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 409 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 436
||||||||||||||||||||||||||||
Sbjct: 178 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 205
Score = 54.9 bits (28), Expect = 1e-11
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 411 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 438
||||||||||||||||||||||||||||
Sbjct: 178 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 205
Score = 54.9 bits (28), Expect = 1e-11
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 413 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 440
||||||||||||||||||||||||||||
Sbjct: 178 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 205
Score = 54.9 bits (28), Expect = 1e-11
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 415 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 442
||||||||||||||||||||||||||||
Sbjct: 178 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 67
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 7
Length of query: 444
Length of database: 844
Length adjustment: 10
Effective length of query: 434
Effective length of database: 834
Effective search space: 361956
Effective search space used: 361956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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