Query= MSMg01no439_f06.b1 MSMg01no439_f06.b1 CHROMAT_FILE:
MSMg01no439_f06.b1 PHD_FILE: MSMg01no439_f06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:25 2005
(424 letters)
>mm_chr18_68436738_68437561
Length = 824
Score = 650 bits (336), Expect = 0.0
Identities = 361/380 (95%), Gaps = 17/380 (4%)
Strand = Plus / Minus
Query: 62 ccacttgagctgctatgtatttaaaggacataatgcacccctggggtatataagtagaaa 121
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 ccacttgaactgctatgtatttaaaggacataatgcacccctggggtatataagtagaaa 765
Query: 122 atggtctggagaaataacttggtcactaaaagcacttgccaatcttccaagtagacacaa 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 atggtctggagaaataacttggtcactaaaagcacttgccaatcttccaagtagacacaa 705
Query: 182 gtttccggcactcatgttgaaagactgaaaactgcctgcaactcctgctccaggagagct 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 gtttccggcactcatgttgaaagactgaaaactgcctgcaactcctgctccaggagagct 645
Query: 242 gacaggt-----------------atctgcacatacatactgaaatacaaataagtcttt 284
||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 644 gacaggtttctggtttcttcaggtatctgcacatacatactgaaatacaaataagtcttt 585
Query: 285 aaaaagttaagtggaagataggaaggaaccagaaggtcacatagcatgagatatgaatga 344
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 584 aaaaagttaagtggaagatagaaaggaaccagaaggtcacatagcatgagatatgaatga 525
Query: 345 cagtaaggagatatgaagaccataaaactcctctggaaaagtataaattcagaattctaa 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 cagtaaggagatatgaagaccataaaactcctctggaaaagtataaattcagaattctaa 465
Query: 405 caaatacatacaggctggat 424
||||||||||||||||||||
Sbjct: 464 caaatacatacaggctggat 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 824
Length adjustment: 9
Effective length of query: 415
Effective length of database: 815
Effective search space: 338225
Effective search space used: 338225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no439_f06.g1 MSMg01no439_f06.g1 CHROMAT_FILE:
MSMg01no439_f06.g1 PHD_FILE: MSMg01no439_f06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:25 2005
(174 letters)
>mm_chr18_68276632_68277205
Length = 574
Score = 317 bits (164), Expect = 2e-91
Identities = 170/172 (98%)
Strand = Plus / Plus
Query: 1 agaactatgctgggtccagttgcagtcggttgccactggcaaccaacttctacctgggta 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 201 agaactatgctgggtccagttgcagtcggttgccactggcaacaaacttctacctggtta 260
Query: 61 cttgatgtgtgtgttgggggggtgagccacaaagtgtggagacactggcctgtaaggccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttgatgtgtgtgttgggggggtgagccacaaagtgtggagacactggcctgtaaggccc 320
Query: 121 actccataccccccttttgtttgcaacctttgtttctccaagacagttttca 172
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actccataccccccttttgtttgcaacctttgtttctccaagacagttttca 372
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 174
Length of database: 574
Length adjustment: 8
Effective length of query: 166
Effective length of database: 566
Effective search space: 93956
Effective search space used: 93956
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
