Query= MSMg01no439_i16.b1 MSMg01no439_i16.b1 CHROMAT_FILE:
MSMg01no439_i16.b1 PHD_FILE: MSMg01no439_i16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:41 2005
(502 letters)
>mm_chr18_74348323_74349224
Length = 902
Score = 845 bits (437), Expect = 0.0
Identities = 470/487 (96%), Gaps = 10/487 (2%)
Strand = Plus / Minus
Query: 1 atgtagaaaacaaaacaaaacaaccctctgtcttgaaaaacaacagcaataacaaaaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 atgtagaaaacaaaacaaaacaaccctctgtcttgaaaaacaacagcaataacaaaaagt 418
Query: 61 gagataggttcttacagagaaagacagattaaggatacatactgacacgtatcagctaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gagataggttcttacagagaaagacagattaaggatacatactgacacgtatcagctaca 358
Query: 121 tacataagaaacaatacacagatatccctgcgtctttggaaacaggacctgatttcactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tacataagaaacaatacacagatatccctgcgtctttggaaacaggacctgatttcactt 298
Query: 181 cccagtacctatttcaggtgcattgcacaacactcactgcagcttgcggagatctaacat 240
||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||
Sbjct: 297 cccagtacctatttcaggtgcattgcacaacactcactgcagcctgaggatatctaacat 238
Query: 241 actcctctggcttcctagggcacctgcatagatgtggtataatagtcaaagctatctaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 actcctctggcttcctagggcacctgcatagatgtggtataatagtcaaagctatctaga 178
Query: 301 gtaagataacttataggacacacacacacacacacacacacacacacacacacacacaca 360
||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 177 ataagacaacttataggacacacacacgcacacacacacacacacacacacac------- 125
Query: 361 catgatttattagagtgactcgtgggttatggtccagataatccaacaacggctgcttct 420
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 124 ---gatttattagagtgactcgtgagttatggtccagataatccaacaacggctgcttct 68
Query: 421 gaatggaaggtccaagaacccagaagttagttgttcagtccatgaggctggatgtttcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 gaatggaaggtccaagaacccagaagttagttgttcagtccatgaggctggatgtttcag 8
Query: 481 ttgggct 487
|||||||
Sbjct: 7 ttgggct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space: 438864
Effective search space used: 438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no439_i16.g1 MSMg01no439_i16.g1 CHROMAT_FILE:
MSMg01no439_i16.g1 PHD_FILE: MSMg01no439_i16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:41 2005
(392 letters)
>mm_chr18_74291976_74292768
Length = 793
Score = 598 bits (309), Expect = e-175
Identities = 367/392 (93%), Gaps = 12/392 (3%)
Strand = Plus / Plus
Query: 1 catcttccttctcagagggtgttgactgagctgcccaagtcccagaaggaaaacaaacaa 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 212 catcttccttctcagagggtgttgactgagctgcccaagtcccagtaggaaaacaaacaa 271
Query: 61 acagacaacaaaaacaaaaagcaaacaaacaaacaaaaaacccctaaagacctaggttct 120
|||||||||||||||||||| |||| |||||||| |||||| |||||||||
Sbjct: 272 acagacaacaaaaacaaaaa----acaag------aaaaaccc-taaagagctaggttct 320
Query: 121 taaatacacctgaaattctagttcgatgtacacctccagggatgtcccctgggaccttat 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaatacacctgaaattctggttcgatgtacacctccagggatgtcccctgggaccttat 380
Query: 181 taaaatgtagct-ccacagaaggagaaagagcctcctcagtttgaggagaaagaaggcac 239
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaaatgtagcttccacagaaggagaaagagcctcctcagtttgaggagaaagaaggcac 440
Query: 240 cttttgttctttacagacagggcaaaataatgcaattctctcccccacttccatcgcagg 299
|||||| | ||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 441 cttttgggccagacagacagggcaaaataatgcaattctcttctccacttccatcgcagg 500
Query: 300 aaaggcactaagaagagagccctggtagggctgtaagatatgggcacttccacagaggaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaaggcactaagaagagagccctggtagggctgtaagatatgggcacttccacagaggaa 560
Query: 360 aactgcatccacaactaanactgagatgtggt 391
||||||||| |||||||| |||||||||||||
Sbjct: 561 aactgcatctacaactaaaactgagatgtggt 592
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 793
Length adjustment: 9
Effective length of query: 383
Effective length of database: 784
Effective search space: 300272
Effective search space used: 300272
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
