NNNNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCATTAAGGGTCTCTTACAGGGATGGCTGTGGTTTTCCAGA
GCCATCAACACTGTCACCATCCCCGACCAAACTATGTTTTATAAACTACT
GCAGAATTGTGCAAACCTGGGATTACAGTGCACCTCATGTTAGAGCAGGA
GAGGTGATTACAGCTCCTGGAGGTGGGAAACTTTTGTGCTCACGTAGACT
CCATCCTTGCTTTTATCAGGGATTGTGCTATCTCGGGCTAACACCATCTG
ACTGTGGCTTGTTTGCTGCATTGGAGTTCTCTGGCTAGTAATTGGGGGCT
GTCTCTTACTGTACTCTACCCTTTCCTCTGGCTGTTACATTCTTTATGCA
CCCTCCATGCTCCCTGAGCACTGAAGGAGTTGTCTTGTGTTCATATCCTG
CTGAGAGTAAAGCACTGAGCCCCAAGTTCTTGAGCACAGATACATATTTT
TATATAAACACAAATCAAGAGTGATGCCTCCAGCCACAAGAAATACGAAT
AAAACTATTCAGATTTTTCAATGTCCATACCACAATGCTGAAGGTGCTTA
GGGCTAAACAATTATTTTTCCTTTTTCCAATCTATGAAAGNGACTGTGGA
AATAATTAAGTATGGGTTAATTGGTACCTTTTCCCCAAAAAAGACATAAT
ACCCCTTCCTTCCACCCCCTGGTGCCCCTTTTTTTGTGGGAACCCCCAGC
CCCCACTAGGGGG

NNNTTCTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTTGGTTTCTCCAGCTATGAT
AATTGAGAGTTTTGCTGCGTATAGTAGCAAGGGCTATGTGACAGGAGGAA
TTCCTTTTCTGGTCCAAACTGACCCATCCAGCAGGTCCAGTTATTCGAGG
ATCTCGAGGGGACCTCCTCCTAATAACCAAATGGGGGGTAGAGAGAGACG
AGAGTCTTGTACGAATAACGACACGGAAACCGTTCTGAAGTTGTATCAAG
ACCCCCATGTATTGAGAAAGGTCCAAGGTTTAAATGCACAAGCAAAGGGG
GAAGTACAGATACTTATCAGTGGGAGGGGTAGGCAATACAAGTAAAAGGA
GAAGTACTTATGGGAGGGGGGGCAATAGAAATGCACATTCTTAGGCAGTT
ACACGGGGAAGCAGGAACTTGGTGGTATCAGGGTGTGGTCAGGACATCCG
TGATGACCTAGGGCTGGAACATCCCGTAGTTCTCGGAATCCATGTGTCGG
TGGCCCGCTTTTGACCCCTTTTTTCCTCTTGGGGGGAGAGGCCCATTTCG
AAATCAGGAACATAAGGGTGGCCTAAAGGGCCCCCACAATCCCCCCCGGT
TTAATATTTTTTTATAAGGCTTATGGGTTAAAATTTTTGGCCCCCGCTTT
ATTTTTAACTCTAAAAAGCGGTTGTTTCTCCCGTTTGATTCTTACATCTC
TTCAGAATTCTAGGCGTG

Query= MSMg01no440_b19.b1 MSMg01no440_b19.b1 CHROMAT_FILE:
MSMg01no440_b19.b1 PHD_FILE: MSMg01no440_b19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:25 2005
         (512 letters)



>mm_chr18_14930172_14931083
          Length = 912

 Score =  884 bits (457), Expect = 0.0
 Identities = 473/479 (98%), Gaps = 2/479 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcattaagggtctcttacagggatggctgtggttttccagagccatcaacactgtc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 gaattcattaagggtctcttacagggatggctgtggttttccagagccatcaacactgtc 418

                                                                       
Query: 65  accatccccgaccaaactatgttttataaactactgcagaattgtgcaaacctgggatta 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 accatccccgaccaaactatgttttataaactactgcagaattgtgcaaacctgggatta 358

                                                                       
Query: 125 cagtgcacctcatgttagagcaggagaggtgattacagctcctggaggtgggaaactttt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 cagtgcacctcatgttagagcaggagaggtgattacagctcctggaggtgggaaactttt 298

                                                                       
Query: 185 gtgctcacgtagactccatccttgcttttatcagggattgtgctatctcgggctaacacc 244
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 gtgctcacatagactccatccttgcttttatcagggattgtgctatctcgggctaacacc 238

                                                                       
Query: 245 atctgactgtggcttgtttgctgcattggagttctctggctagtaattgggggctgtctc 304
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 237 atctgactgtggcttgtttgctgcattggagttctctggctagtaattggaggctgtctc 178

                                                                       
Query: 305 ttactgtactctaccctttcctctggctgttacattctttatgcaccctccatgctccct 364
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 177 ttactgtactctaccctttcctctgactgttacattctttatgcaccctccatgctccct 118

                                                                       
Query: 365 gagcactgaaggagttgtcttgtgttcatatcctgctgagagtaaagcactgagccccaa 424
           |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||
Sbjct: 117 gagcactgaaggagttgtcttgtgttcatatcctgct--gagtaaagcactgagccccaa 60

                                                                      
Query: 425 gttcttgagcacagatacatatttttatataaacacaaatcaagagtgatgcctccagc 483
           |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 59  gttcttgagcacagatacatatttttatgtaaacacaaatcaagagtgatgcctccagc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 912
Length adjustment: 10
Effective length of query: 502
Effective length of database: 902
Effective search space:   452804
Effective search space used:   452804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)