Query= MSMg01no440_g21.b1 MSMg01no440_g21.b1 CHROMAT_FILE:
MSMg01no440_g21.b1 PHD_FILE: MSMg01no440_g21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:52 2005
(438 letters)
>mm_chr18_54570169_54571006
Length = 838
Score = 785 bits (406), Expect = 0.0
Identities = 425/434 (97%), Gaps = 5/434 (1%)
Strand = Plus / Minus
Query: 5 gaattctcttctttattgcaaaaaacaacaacaacaacaaaaacaaaacaaaaccaaaac 64
||||||||||||||| | |||||||||||||||||||| ||||||||||||||||
Sbjct: 706 gaattctcttctttaaagtaaaaaacaacaacaacaaca-----aaaacaaaaccaaaac 652
Query: 65 aaaacaaaaacaaccactgaagtaaggtcccagaactaactaggtcagctgacatcaaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 aaaacaaaaacaaccactgaagtaaggtcccagaactaactaggtcagctgacatcaaga 592
Query: 125 ttcagtctttctgtttttgcttttgtttttattctctaaaatatctaacacttcctcatc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 ttcagtctttctgtttttgcttttgtttttattctctaaaatatctaacacttcctcatc 532
Query: 185 aaccattctgtgcagtcatagagtctgagcatatgcaagttcccatgctatctgcccgat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 aaccattctgtgcagtcatagagtctgagcatatgcaagttcccatgctatctgcccgat 472
Query: 245 gggaaggtgatcaccataaaaccaaagcagcagtagtagatggagtgattttaaaatgca 304
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gggaaggtgattaccataaaaccaaagcagcagtagtagatggagtgattttaaaatgca 412
Query: 305 tcatggtttttacaaaaagaagaataacacaatgaaagccatcccaaaagagagggtact 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tcatggtttttacaaaaagaagaataacacaatgaaagccatcccaaaagagagggtact 352
Query: 365 ggtagcattcgcctgggtggacctatgagattctttgctgaagagtgagaacagctattg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ggtagcattcgcctgggtggacctatgagattctttgctgaagagtgagaacagctattg 292
Query: 425 aggctgtgaatgag 438
||||||||||||||
Sbjct: 291 aggctgtgaatgag 278
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 838
Length adjustment: 9
Effective length of query: 429
Effective length of database: 829
Effective search space: 355641
Effective search space used: 355641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no440_g21.g1 MSMg01no440_g21.g1 CHROMAT_FILE:
MSMg01no440_g21.g1 PHD_FILE: MSMg01no440_g21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:52 2005
(393 letters)
>mm_chr18_54394381_54395173
Length = 793
Score = 752 bits (389), Expect = 0.0
Identities = 392/393 (99%)
Strand = Plus / Plus
Query: 1 ttccgagcagctctcaagtttcctgcagtctgctgttaagaagtctctttttccctgacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttccgagcagctctcaagtttcctgcagtctgctgttaagaagtctctttttccctgacg 260
Query: 61 gagctgccagagtccagttagcgcctggtcagtctccctcagtcattaatgaactgcccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagctgccagagtccagttagcgcctggtcagtctccctcagtcattaatgaactgcccc 320
Query: 121 agaagaccatgttcttctctgctgtcaactgcccaggaaactccaagaattatttctttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaagaccatgttcttctctgctgtcaactgcccaggaaactccaagaattatttctttc 380
Query: 181 agacatcctccggctttctagagatgcacctcctaatttagtggtatctatttatttccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agacatcctccggctttctagagatgcacctcctaatttagtggtatctatttatttccc 440
Query: 241 aggaaaacttggaatcagagacgatgtgaactgaaacacatttcattatgactgactgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggaaaacttggaatcagagacgatgtgaactgaaacacatttcattatgactgactgct 500
Query: 301 aaataacatgcagggaaatggtcagaaaggaaacccagcattgctgatgctggccttcat 360
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 501 aaataacatgcagggaaatggtcagaaaggaaacccagtattgctgatgctggccttcat 560
Query: 361 tcttcttgtattttttttaaacttgcttccaac 393
|||||||||||||||||||||||||||||||||
Sbjct: 561 tcttcttgtattttttttaaacttgcttccaac 593
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 393
Length of database: 793
Length adjustment: 9
Effective length of query: 384
Effective length of database: 784
Effective search space: 301056
Effective search space used: 301056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
