NTTTCCCCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCCTCCTTGTATCGTGATGAATGATGGTTTTGATGTGTT
TTTGGATTCAGTTTGTGAGAATGTTATTGAGTATTATTGCATACACATTC
ATAAGGGAAATTGGTCTGAAGTTCTCTTTCTTTGTTGCTCATGGATTGCC
AGGATTTACATATTAAAAAATGGCTTACCAAAAGAGATCTACAAATTCAA
TACAATCCCTATCAATATTCCAACTCAATTCTTCACAGAGATAGAAAGAG
AAATTCTCAAATTCATTTGGAACAACACAAAATTTTTTATAGTGAAAAGC
ATTCTCAACAGTAATAGAACTTCTGTATCAATCACCATCCCTGACCGCCA
ACTCAACTACAGAGCAATAGCGACACCCCCCCCCCCCTCTTGGTACATCC
ACTGACTTTGTCACCTGTATTGCTCTCACCATGACTACACCCCACCCATC
TCCTGCCCTCCTCGATTCTTGATCCATCACATATTCTCCACTCACGCGTC
TATTCCTCACGTTCCCTGGTCTCCTTATTCCCCCCCCCCGTCTCCCCACT
TGCCACCGCTCCCTTACAATTGTCCCTCATCCCTCCTCCTTCTCCCCCTC
TCACTTTTTTACTATCGTCATCACTCTACTTTTCCTGTTCTAGACTCACT
CCCTCTTCTTCTCTACCCCTCTTACTCCTTCCACCATACTCTTTCCTCCT
CAACACTCTCACTCTCAAAACCTACCCTCCCTCCTAATAATCCTTCTTTC
TTCN

NNNTTCCTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATCTCATCAGTCTCT
CTTCTGATTAGGAAAGACGGTCATGTCTTAAAGCGTCGCAAAATGTCTAT
TTTGTGTATTTCTTTGTATATACATGGATATTACAGATCACACAAAGATT
CGTGGGAGACTGTATTAGTATCATTTGGCATATTTACTAAGGGGTTTGAA
AAGTCTCTAATCATTATGGAGGGAAAAAAAAGGATAACTTTTGAGTTGTA
AGAAATTGTGCCTGCAGAATTTTGAAAAGTATGGCTCCTTATTATAACTG
CGCTTGAATTTTTGAATCTGACGTTTTGGAAGAACGTTTATAAAATTGGA
GATTGAGCTGAGAACTGCATGTGTTCTAGAACAGCACTTTGCCATTGAAC
ACACAGAGCAATGAGTTAAGATGTTTAAGTAAATTTATTTTTAATCTGAA
GAAGATTGCAAATGTCATAAACAGATTTTTATTCATAAGTCTATATCTCG
GGTGGTAAATTAATAATGGAAATACAGATCAAACAAGGATAAAGGAGAAA
AAGAAAACTGGGAGAAGTTTGTAGACAGAGAAATGGTTTAAAAGAAATAA
ATTTTTAGAGAAAAGAGAGCCCCCCCTTGTGAGGAACTTAAATATTGGGG
TTCCATACGAAAAAGTCTCAACAATTCCAGTCAGAGAAAAAACTGGTTAT
ACATTG

Query= MSMg01no440_n16.g1 MSMg01no440_n16.g1 CHROMAT_FILE:
MSMg01no440_n16.g1 PHD_FILE: MSMg01no440_n16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:27 2005
         (472 letters)



>mm_chr18_27273557_27274429
          Length = 873

 Score =  727 bits (376), Expect = 0.0
 Identities = 451/476 (94%), Gaps = 7/476 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   atctcatcagtctctcttctgattaggaaagacggtcatgtcttaaagcgtcgcaaaatg 60
           |||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 673 atctcatccgtctctcttctgattaggaaagactgtcatgtcttaaagcgtcacaaaatg 614

                                                                       
Query: 61  tctattttgtgtatttctttgtatatacatggatattacagatcacacaaagattcgtgg 120
            |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 613 gctattttgtgcatttctttgtatatacatggatattacagatcacacaaagattcatgg 554

                                                                       
Query: 121 gagactgtattagtatcatttggcatatttactaaggggtttgaaa-agtctctaatcat 179
           ||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 553 gagactgtattagtatcttttggcatatttactaaggggtttaaaatagtctctaatcat 494

                                                                       
Query: 180 tatggagggaaaaaaaa-ggataacttttgagttgtaagaaattgtgcctgcagaatttt 238
           || |||  ||||||||| ||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 493 tacgga-agaaaaaaaagggataac-tttgagttgtaagaaattgtgtctgcagaatttt 436

                                                                       
Query: 239 gaaaagtatggctccttattataactgcgcttgaattttt-gaatctgacgttttggaag 297
           |||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||
Sbjct: 435 gaaaagtatggctccttattataactacgcttgaatttttggaatctgacattttggaag 376

                                                                       
Query: 298 aac-gtttataaaattggagattgagctgagaactgcatgtgttctagaacagcactttg 356
            || |||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 375 -actgtttgtaacattggagattcagctgagaactgcatgtgttctagaacagcactttg 317

                                                                       
Query: 357 ccattgaacacacagagcaatgagttaagatgtttaagtaaatttatttttaatctgaag 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ccattgaacacacagagcaatgagttaagatgtttaagtaaatttatttttaatctgaag 257

                                                                   
Query: 417 aagattgcaaatgtcataaacagatttttattcataagtctatatctcgggtggta 472
           |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 256 aagattgcaaatgtcataaacagatttttattgataagtctatatctcaggtggta 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 873
Length adjustment: 10
Effective length of query: 462
Effective length of database: 863
Effective search space:   398706
Effective search space used:   398706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)