Query= MSMg01no440_n19.b1 MSMg01no440_n19.b1 CHROMAT_FILE:
MSMg01no440_n19.b1 PHD_FILE: MSMg01no440_n19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:27 2005
(539 letters)
>mm_chr18_3530778_3531716
Length = 939
Score = 692 bits (358), Expect = 0.0
Identities = 367/370 (99%)
Strand = Plus / Minus
Query: 5 gaattcactttgggtatcaaattccagctttggggcacattgaagatttgcaaatacaat 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gaattcactttggggatcaaattccagctttggggcacattgaagatttgcaaatacaat 311
Query: 65 ttacattttatgattttgcaaaataaattctgatactagtcactgaaattttgaaattgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ttacattttatgattttgcaaaataaattctgatactagtcactgaaattttgaaattgt 251
Query: 125 accactctctcttttgctttatttttgctatttttttggttttggtttttgttttaaaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 accactctctcttttgctttatttttgctatttttttggttttggtttttgttttaaaga 191
Query: 185 cagtatctcactatatttcaatggctgtcatggatctcaatatgcagaccaggctagcct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 cagtatctcactatatttcaatggctgtcatggatctcaatatgcagaccaggctagcct 131
Query: 245 taaacttgtaagcctcttcctgcctcagtctctccaatgctggattgcaagcactaatca 304
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 130 taaacttgtaagcctcttcctgcctcagcctctccaatgctggattgcaagcactaatca 71
Query: 305 gtgtgttctgctcttctttattagaaactaaaaatcaaaagctggggatacagctcagtg 364
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 gtgtgctctgctcttctttattagaaactaaaaatcaaaagctggggatacagctcagtg 11
Query: 365 gcaaagtcct 374
||||||||||
Sbjct: 10 gcaaagtcct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 539
Length of database: 939
Length adjustment: 10
Effective length of query: 529
Effective length of database: 929
Effective search space: 491441
Effective search space used: 491441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no440_n19.g1 MSMg01no440_n19.g1 CHROMAT_FILE:
MSMg01no440_n19.g1 PHD_FILE: MSMg01no440_n19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:27 2005
(359 letters)
>mm_chr18_3403495_3404253
Length = 759
Score = 671 bits (347), Expect = 0.0
Identities = 356/359 (99%)
Strand = Plus / Plus
Query: 1 aggtcctctggaagagcattcagcactcttaactttagagctatctctctaatcctaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggtcctctggaagagcattcagcactcttaactttagagctatctctctaatcctaatt 260
Query: 61 acatctgtatgaacttgctggggcacagacttgaacacagaattttaatatccagctgtt 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acatctgtatgaatttgctggggcacagacttgaacacagaattttaatatccagctgtt 320
Query: 121 tttttttttcccagcttagtatatctagagtatgatacagattctgctgaattcatctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttttttttcccagcttagtatatctagagtatgatacagattctgctgaattcatctct 380
Query: 181 tagatagttttctgtgaagcaatttgatttgtttgggggcaggaatctaataaaatagat 240
|||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 381 tagataattttctgtgaagcaatttgatttgtttgggggctggaatctaataaaatagat 440
Query: 241 tttgttctgtattttatggaatagctgagtggcttataagtgactttgaaatagacagct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttgttctgtattttatggaatagctgagtggcttataagtgactttgaaatagacagct 500
Query: 301 tacctagaaaattacctccttaagtaactattacttcatttgatcatatattcatgtgt 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tacctagaaaattacctccttaagtaactattacttcatttgatcatatattcatgtgt 559
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 359
Length of database: 759
Length adjustment: 9
Effective length of query: 350
Effective length of database: 750
Effective search space: 262500
Effective search space used: 262500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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