Query= MSMg01no444_k08.b1 MSMg01no444_k08.b1 CHROMAT_FILE:
MSMg01no444_k08.b1 PHD_FILE: MSMg01no444_k08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:36 2005
(130 letters)
>mm_chr18_41331218_41331748
Length = 531
Score = 226 bits (117), Expect = 3e-64
Identities = 127/131 (96%), Gaps = 3/131 (2%)
Strand = Plus / Minus
Query: 1 gaaaaaatgagtatacccaaaaatcatattcctctgagctttaattcaaaccatgtctcc 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 gaaaaaatgagtagacccaaaaatcatattcctctgagctttaattcaaaccatgtctcc 271
Query: 61 taagcagctttacaaattttcttccattggtgctca--tttttttttaatctccttctta 118
|||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 270 taagcagctttacaaattttcttccattggtgctcagttttttttttaatctcctt-tta 212
Query: 119 ggaattattat 129
|||||||||||
Sbjct: 211 ggaattattat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 3
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 130
Length of database: 531
Length adjustment: 8
Effective length of query: 122
Effective length of database: 523
Effective search space: 63806
Effective search space used: 63806
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no444_k08.g1 MSMg01no444_k08.g1 CHROMAT_FILE:
MSMg01no444_k08.g1 PHD_FILE: MSMg01no444_k08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:36 2005
(240 letters)
>mm_chr18_41245899_41246538
Length = 640
Score = 402 bits (208), Expect = e-117
Identities = 232/240 (96%)
Strand = Plus / Plus
Query: 1 tatgaattctactttcagatgaggctggcttttcatggatggcaagggaaatgcagcagc 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatgaattctactttcagataaggctggcttttcatggatggcaagggaaatgcagcagc 260
Query: 61 ttctacagcatgaatatatgatattccacaacacattccataacctcatggtcctcccaa 120
|||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||
Sbjct: 261 ttctacagcatgaatatatgatattccacaacacattccataacctcacgatcatcccaa 320
Query: 121 agtgcccctgtggatgttccaccatgagatggctacacttgcatgtctctctatctacag 180
|||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 agtgcccctgtggatgctccaccatgagatggctacacttgcatgtctctctgtctacag 380
Query: 181 cagaaacaactcaaagattcttttgaaacccatctttgattttgccacatctttgtccag 240
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagaaacaactcaaacatttttttgaaacccatctttgattttgccacatctttgtccag 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
