Query= MSMg01no447_k02.b1 MSMg01no447_k02.b1 CHROMAT_FILE:
MSMg01no447_k02.b1 PHD_FILE: MSMg01no447_k02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:35 2005
(243 letters)
>mm_chr18_77911625_77912267
Length = 643
Score = 443 bits (229), Expect = e-129
Identities = 239/243 (98%), Gaps = 2/243 (0%)
Strand = Plus / Plus
Query: 1 tcatctttcttcctctatgaaatctcaaagattgcctctgtatcacacagtatcagatgc 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 tcatctttcttcctctatgaaatctcaaagattgcctctgtagcacacagtatcagatgc 260
Query: 61 aataatacagggaaaacagacatgctaacatataataaactacagacccttttatttatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aataatacagggaaaacagacatgctaacatataataaactacagacccttttatttatg 320
Query: 121 agagctgaaacaagccaatttctgagtaactttttaaagcctgggagttgaaggggaaag 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 agagctgaaacaagccaatttctgagtaactttttaaagcctgggagatgaaggggaaag 380
Query: 181 tttttgagcattctttacaatctagtgacaaggtaggatttaaaaaaaaaaaaaaaaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 tttttgagcattctttacaatctagtgacaaggtaggatttaaaaaaaaaaaaaa--ggt 438
Query: 241 gca 243
|||
Sbjct: 439 gca 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no447_k02.g1 MSMg01no447_k02.g1 CHROMAT_FILE:
MSMg01no447_k02.g1 PHD_FILE: MSMg01no447_k02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:35 2005
(245 letters)
>mm_chr18_78045501_78046145
Length = 645
Score = 427 bits (221), Expect = e-124
Identities = 239/245 (97%)
Strand = Plus / Minus
Query: 1 ttaaatttgaagtttatgagtgaggtcagacatttttccatgttcacacaattccctcct 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 445 ttaaatttgaagtttatgagtgaggtcagacatttttccatgttcaaacaattccctcct 386
Query: 61 gttctcttttgataattagggagatcacttttaaatcaggattaggaggtgggtgggaaa 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 385 gttctcttttgagaattagggagatcacttttaaatcaggattaggaggtgggtggggaa 326
Query: 121 aagaaaagagcctctgctccaaggtacggcccaacatcccctgctaccttccgaatcaca 180
|||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 325 aagaaatgagcctctgctccaaggtacggcccaacaacccctgctaccttccgaatcaca 266
Query: 181 tgactcccagcttcagagcacacaactgactccgattggtggagacgaatgccagtctct 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 265 tgactcccagcttcagagcacacaaatgactccgattggtggagacgaatgccagtctct 206
Query: 241 cagac 245
|||||
Sbjct: 205 cagac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
