Query= MSMg01no447_m14.b1 MSMg01no447_m14.b1 CHROMAT_FILE:
MSMg01no447_m14.b1 PHD_FILE: MSMg01no447_m14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:48 2005
(580 letters)
>mm_chr18_20817532_20818511
Length = 980
Score = 1098 bits (568), Expect = 0.0
Identities = 577/580 (99%)
Strand = Plus / Plus
Query: 1 atgagaggggtggtctgagcactaacaagagtaacttagtgggaagaccagaggtcagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgagaggggtggtctgagcactaacaagagtaacttagtgggaagaccagaggtcagag 260
Query: 61 atgagggggcatggctggctagcagagcaatcctagcaggtcactctgtgttagtgtctg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 261 atgagggggcatggctggctagcagagcaatcctagcaggtcactctgtgttagtgtccg 320
Query: 121 gtcagctggaaacttctgacttgctttcccatgtctaactgataagagctggatcaactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtcagctggaaacttctgacttgctttcccatgtctaactgataagagctggatcaactg 380
Query: 181 acacgttgcatttcacacccatttgtcccatgctacttctttcaggacactcaagggccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acacgttgcatttcacacccatttgtcccatgctacttctttcaggacactcaagggccc 440
Query: 241 ttttgtcaggaaggaatcagatcccaacaggtacatctaactaaagttatactctgacca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttgtcaggaaggaatcagatcccaacaggtacatctaactaaagttatactctgacca 500
Query: 301 cactcacataattgctgggattacaaaaatgcctcagcagctaagagcagggcttgctct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 501 cactcacataattgctgggattacaaaaatgcctcagcagctaagagcagggcctgctct 560
Query: 361 tcctaagaatctacatgtgattcccagcacccacatggaagctcacaaccatctgtaacc 420
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcctaagaatctacgtgtgattcccagcacccacatggaagctcacaaccatctgtaacc 620
Query: 421 acagttcctggggatctgacaccctcctctggcctgttcaggcataatgcatacatgatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acagttcctggggatctgacaccctcctctggcctgttcaggcataatgcatacatgatg 680
Query: 481 tgcactaacatacatgtaagcaaaaatatccacaaacataatatcatagaataaaattta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgcactaacatacatgtaagcaaaaatatccacaaacataatatcatagaataaaattta 740
Query: 541 acttaaaaaattaaatatctaattgctaccctttgagtaa 580
||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 acttaaaaaattaaatatctaattgctaccctttgagtaa 780
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 980
Length adjustment: 10
Effective length of query: 570
Effective length of database: 970
Effective search space: 552900
Effective search space used: 552900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no447_m14.g1 MSMg01no447_m14.g1 CHROMAT_FILE:
MSMg01no447_m14.g1 PHD_FILE: MSMg01no447_m14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:48 2005
(429 letters)
>mm_chr18_20894165_20894992
Length = 828
Score = 642 bits (332), Expect = 0.0
Identities = 350/356 (98%), Gaps = 1/356 (0%)
Strand = Plus / Minus
Query: 74 gtttaccaccagtgccagctacaatagtctattgagtgattgcctaaagtttgttacctt 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828 gtttaccaccagtgccagctacaatagtctattgagtgattgcctaaagtttgttacctt 769
Query: 134 ggttgaaatattgcatcctgctggtcccgagcccctaacccccagataaggattctctgt 193
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 768 ggttgaaatattgcatcctgttggtcccgagcccctaacccccagataaggattctctgt 709
Query: 194 gtagacctggctggctaagaactcagagagctgcctgcctctgcctcatgatttctggga 253
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 708 gtagacctggctggctaagaactcagagagctgcctgcctctgcctcaggagttctggga 649
Query: 254 ttaaaggcgtttgctgctaccagctagtctgttgtttttttatatttgataatgtgactg 313
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 648 ttaaaggcgtttgctgctaccagctagtctgttg-ttttttatatttgataatgtgattg 590
Query: 314 taacttggattaaaaccacttgttgaataaaataatgttccatagattgtcttggatgat 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 taacttggattaaaaccacttgttgaataaaataatgttccatagattgtcttggatgat 530
Query: 374 tgaggagctggtgcaagccttggttctagcttgctagcatgctgagcccggagatt 429
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 529 tgaggagctggtgcaagccttggttctagcttgccagcatgctgagcccggagatt 474
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 828
Length adjustment: 9
Effective length of query: 420
Effective length of database: 819
Effective search space: 343980
Effective search space used: 343980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
