Query= MSMg01no448_a17.b1 MSMg01no448_a17.b1 CHROMAT_FILE:
MSMg01no448_a17.b1 PHD_FILE: MSMg01no448_a17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:09 2005
(429 letters)
>mm_chr18_34991153_34991984
Length = 832
Score = 789 bits (408), Expect = 0.0
Identities = 426/434 (98%), Gaps = 5/434 (1%)
Strand = Plus / Minus
Query: 1 ctgtgagccaccatatagttgctggggattgaactcaggacctctggaagaaaagccaat 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 606 ctgtgagccaccatatagttgctagggattgaactcaggacctctggaagaaaagccaat 547
Query: 61 gctcttaactgctgagccatctctccagcccttgtgtgtgtgtgtttaaatgtttttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gctcttaactgctgagccatctctccagcccttgtgtgtgtgtgtttaaatgtttttctt 487
Query: 121 aaaaaacactattttatgtgcaaaatgttttgcttgcatgtataatgtaagctcatgtac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 aaaaaacactattttatgtgcaaaatgttttgcttgcatgtataatgtaagctcatgtac 427
Query: 181 cgcatttgtgcccagagttcagaaaatttacaaatgaccatgaacattcacat---ggat 237
|||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 426 cgcatttgtgcccagagttcagaaaatttacaaatggccatgaacattcacatcatggat 367
Query: 238 gttggaactaaagctgggtcctttgcaagagcaaacaaacaatactcttgatgctctagc 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gttggaactaaagctgggtcctttgcaagagcaaacaaacaatactcttgatgctctagc 307
Query: 298 ctcacgctcttacttttttttttttt--ggagctagggtttctctatgcagcccaggttg 355
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 306 ctcacgctcttactttttttttttttttggagctagggtttctctatgcagcccaggttg 247
Query: 356 gcctctatgatcttcctgacacaagcaagctgtcatgtgctacagtcacaggtgtgcact 415
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 246 gcctctatgatcttcctgacacaagcaagctgtcatgtgctacagtcataggtgtgcact 187
Query: 416 accatgccctgtgt 429
||||||||||||||
Sbjct: 186 accatgccctgtgt 173
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 832
Length adjustment: 9
Effective length of query: 420
Effective length of database: 823
Effective search space: 345660
Effective search space used: 345660
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no448_a17.g1 MSMg01no448_a17.g1 CHROMAT_FILE:
MSMg01no448_a17.g1 PHD_FILE: MSMg01no448_a17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:10 2005
(419 letters)
>mm_chr18_34834836_34835654
Length = 819
Score = 760 bits (393), Expect = 0.0
Identities = 410/419 (97%), Gaps = 7/419 (1%)
Strand = Plus / Plus
Query: 1 tgggactaacggtacatgtgactatgcctatcttaagtattttatttttacttttagtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 tgggactaacggtacatgtgactatgcctatcttaagtattttatttttacttttagtgt 267
Query: 61 gaatcagtgtgtgtgtgtgtcctacgtgagcctgaggaagccagagatggtgttaaatcc 120
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gaatcagtgtgtgtgtgt--cctacgtgagcctgaggaagccagagatggtgttaaatcc 325
Query: 121 ccttcaagaagttgtggatgctgggaactcaattcaggtcctccgaaagaacagccagtg 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 326 ccttcaagaagttgtggatgctgggaacccaattcaggtcctccgaaagaacagccagtg 385
Query: 181 ctcttaaccagtgagccatccttccagcccttcactgttattcctgtcttacaaatgagg 240
|||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 386 ctcttaaccagtgagccatccttccaacccttcactgttattc-----ttacaaatgagg 440
Query: 241 aacttcaggctaagtgagagttaaagtcacagaatcttgtgctgtttgctgcagagctgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aacttcaggctaagtgagagttaaagtcacagaatcttgtgctgtttgctgcagagctgt 500
Query: 301 gtgctcttgaacaccaggaagggaggcttatgccattgtggtttacaaagaaaaaaagca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgctcttgaacaccaggaagggaggcttatgccattgtggtttacaaagaaaaaaagca 560
Query: 361 gcttttagttgcaaaattagctttaaaccatgccctcagatacatttgtaagctcttca 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcttttagttgcaaaattagctttaaaccatgccctcagatacatttgtaagctcttca 619
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 819
Length adjustment: 9
Effective length of query: 410
Effective length of database: 810
Effective search space: 332100
Effective search space used: 332100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
