TTTCTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCCACTCACCATTGCTCCTAAGATCCTGGGCATGCTAGGGCAC
CTGGGGTGTAGCAGATCTAATACTCTTACTACACCCTCTTCTGCCATGTT
CCCTGAACCTTCAGTGATATAGCTATCCTATTTAGGTCCTAGGGCTAAGC
ATATCACTTTCTAGAGGCCAAACCTCTGCCACAATTGTGTTTTAGCCTAT
ATGCCAAGCTCACATTGATGATGTGTAGTTTTTTTTACAAATGCCAAGGT
AGAAAGTACATTATAATGGTAAGACTCCGAGAAAGCTTTACCATGCAATT
TTTTATGGATGTTTATAAGGTTCTTTTCAGAGACTACAGTGGCTTATATA
AATAGCTAAGTGTTTGTGATGAGAAATGCAAACCCTGTCATTGTCACTGA
AATAATCTATGTGATTTAATTCCATGCTTTGCTCCAAGGAAAGAGGAACA
GTGAAAATGAGATCATTAAAGAGAATAGAATGTAGACTGCCACATCAAAT
AAGAAGAAGTGAGAAGCCTGTGTTTTCATCCCAGTGGACCAAGAGGAAAG
GTAGGAAAGATGCAGGAAAGAAAGCAGTTTTACCTTTTTCCCTAAACCCC
TATTTTACCTCCCTTCTTTTACTTCCCTGGGAAAATCCAAACCGGTTTTC
TGGTAAGTCCCTGGGGAATTATTCCCCCTGGCCCTAATAAACTACAATGG
GGTACTGGATA

TTTTTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTTCTTTATGTCCTCTAC
CATCATCATGAGATATGCTTTTAAATCCAGGTCTACCTTTTCAGGTGTGT
TAGGGTGTCCTGGATTGGGCGAAGTGGGCGTTCTGGGTTCTGATGATGGT
GAGTGGTCCTGGCTTCTGTTAGTAGGATTCTTACGTTTACCTTTCGCCAT
CTGGCAATCTCTGGAGTTAGTTGTTATAGTTGTCTTTGTTAAAAGATTGT
TCCTCTGTTGATTTTGTTACCCTCTATCTTCAGGCGTGGGAGACAAGCTC
TCTTCTCTGAGTTTCAGTGGTCAGAGCAGTCTCTGTAGGCAAGCTCTCCT
CTCTCAGGGAAGGTGTACAGTTATCTGGTGTTTGGACCTCCTCCTGGCTG
AAGGTGAAGGCCCAAAACAGGATCTTTTCCCGAAGCTGTGTTGTTTTGGC
CATTAAGGTGGCCAGTTGTCTGTAGTCCAATAAGTTCCATCCTCCAAACC
TCTGGTCTCTTTTCCTCCAATTGGTTTGTTTTCCCTCCCTTTAAAATAGT
GTTCCCCTTCCAACCCTTTCAAATCTCTTTCTTTACCCAAAAATTTTGTT
CTCCCTTACTCCTTACAGCACCCTTTTTTTTTTGGTTTCCTTTCCATTTT
TGTGTTTTTTAATTCCCTCCCCCCCTTTTCTTCTTTTTTTTCTCTCCGTT
ATTTCCCTTCCTTTTTTCCCTTG

Query= MSMg01no448_f22.b1 MSMg01no448_f22.b1 CHROMAT_FILE:
MSMg01no448_f22.b1 PHD_FILE: MSMg01no448_f22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:37 2005
         (484 letters)



>mm_chr18_49683148_49684031
          Length = 884

 Score =  882 bits (456), Expect = 0.0
 Identities = 474/480 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccactcaccattgctcctaagatcctgggcatgctagggcacctggggtgtagca 64
           ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccactcaccagtgatcctaagatcctgggcatgctagggcacctggggtgtagca 264

                                                                       
Query: 65  gatctaatactcttactacaccctcttctgccatgttccctgaaccttcagtgatatagc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gatctaatactcttactacaccctcttctgccatgttccctgaaccttcagtgatatagc 324

                                                                       
Query: 125 tatcctatttaggtcctagggctaagcatatcactttctagaggccaaacctctgccaca 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tatcctatttaggtcctagggctaagcatatcactttctagaggccaaacctctgccaca 384

                                                                       
Query: 185 attgtgttttagcctatatgccaagctcacattgatgatgtgtagttttttttacaaatg 244
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gttgtgttttagcctatatgccaagctcacattgatgatgtgtagttttttttacaaatg 444

                                                                       
Query: 245 ccaaggtagaaagtacattataatggtaagactccgagaaagctttaccatgcaattttt 304
           |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 445 ccaaggtagaaagtacattaaaatggtaagactcggagaaagctttaccatgcaattttt 504

                                                                       
Query: 305 tatggatgtttataaggttcttttcagagactacagtggcttatataaatagctaagtgt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tatggatgtttataaggttcttttcagagactacagtggcttatataaatagctaagtgt 564

                                                                       
Query: 365 ttgtgatgagaaatgcaaaccctgtcattgtcactgaaataatctatgtgatttaattcc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttgtgatgagaaatgcaaaccctgtcattgtcactgaaataatctatgtgatttaattcc 624

                                                                       
Query: 425 atgctttgctccaaggaaagaggaacagtgaaaatgagatcattaaagagaatagaatgt 484
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 625 atgctttgctccaaggaaagaggaacagagaaaatgagatcattaaagagaatagaatgt 684


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 884
Length adjustment: 10
Effective length of query: 474
Effective length of database: 874
Effective search space:   414276
Effective search space used:   414276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)