Query= MSMg01no450_o10.b1 MSMg01no450_o10.b1 CHROMAT_FILE:
MSMg01no450_o10.b1 PHD_FILE: MSMg01no450_o10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:58 2005
(236 letters)
>mm_chr18_75358972_75359607
Length = 636
Score = 439 bits (227), Expect = e-128
Identities = 233/235 (99%)
Strand = Plus / Minus
Query: 1 taccattacagtcatactcatgattggcattaaatattaccacttcctcttagaaacgcc 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 435 taccattacagtcatactcatgattggcattaaatatgaccacttcctcttagaaacgcc 376
Query: 61 aatgttgtactctgattaatggaagaaactattaggaggactttaaaactccatgaattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 aatgttgtactctgattaatggaagaaactattaggaggactttaaaactccatgaattc 316
Query: 121 aacacattttgtggaataaataactacacagcactaatgcacgattcagtattactggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 315 aacacattttgtggaataaataactacacagcactaatgcacgattcagtaatactggct 256
Query: 181 aaggatgaagcgggtgcagatggacccagctcaagcccccactagcaccttgcaa 235
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 aaggatgaagcgggtgcagatggacccagctcaagcccccactagcaccttgcaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no450_o10.g1 MSMg01no450_o10.g1 CHROMAT_FILE:
MSMg01no450_o10.g1 PHD_FILE: MSMg01no450_o10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:58 2005
(244 letters)
>mm_chr18_75210991_75211633
Length = 643
Score = 426 bits (220), Expect = e-124
Identities = 238/244 (97%), Gaps = 1/244 (0%)
Strand = Plus / Plus
Query: 1 ccgtttgtaatttgattgaggtctcattcaccatgccaccttagttgtctaggaactata 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 ccgtttgtaatttgattgaggtctcattcaccatgccaccttggttgtctaggaactata 260
Query: 61 gacaagctggccttgaactcagaaagctctgccaatctcccaagtgcaggattaaaggca 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacaagctggccttgaactcagagagctctgccaatctcccaagtgcaggattaaaggca 320
Query: 121 tgtgtcagcacatccagccgctgcctgccttcccgttaagcaacaaagctggccgtggtt 180
|||||||||||||||||||||||||||| ||||| ||||| |||||||||||| ||||||
Sbjct: 321 tgtgtcagcacatccagccgctgcctgc-ttcccattaaggaacaaagctggctgtggtt 379
Query: 181 gtgctcactttcaatccagcactagggtggcagagagcggcagacttctgtgaagacggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gtgctcactttcaatccagcactagggtggcagagagcggcagacttctgtgaagacggt 439
Query: 241 ggcg 244
||||
Sbjct: 440 ggcg 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 643
Length adjustment: 9
Effective length of query: 235
Effective length of database: 634
Effective search space: 148990
Effective search space used: 148990
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
