Query= MSMg01no451_b06.b1 MSMg01no451_b06.b1 CHROMAT_FILE:
MSMg01no451_b06.b1 PHD_FILE: MSMg01no451_b06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:12 2005
(663 letters)
>mm_chr18_28731499_28732561
Length = 1063
Score = 1160 bits (600), Expect = 0.0
Identities = 645/660 (97%), Gaps = 2/660 (0%)
Strand = Plus / Plus
Query: 5 gaattctttgctggaaatacataaacaggtcacttcttgtggaacatttaattacctgtg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttgctggaaatacataaacaggtcacttcttgtggaacatttaattacctgtg 264
Query: 65 acatactcctgggttctcttctctattacagaatcaaatagtgagacaatcaagcctcta 124
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 265 acatactcctgggttctcttctctattacagaatcaaagagtgagacaatcaagcctcta 324
Query: 125 tcacatgttcaaagatggaaaaattgttagattcttggactttatgatgaaaaaaagata 184
||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 325 tcacatgttcaaagagggaaaaattgttagattcttggactttctgatgaaaaaaagata 384
Query: 185 gccattgttggactagcctgaccacaggacaggctctctaagacattcccttttaatata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gccattgttggactagcctgaccacaggacaggctctctaagacattcccttttaatata 444
Query: 245 tattccgtttcatccaatttttatataattatattctgttgtattatatgcctagatgta 304
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 445 tgttccgtttcatccaatttttatataattatattctgttgtattatatgcctagatgca 504
Query: 305 ccatttctaagagaaacattttaaattggaaggataaaatagactaagagagattgacag 364
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ccatttctaagagaagcattttaaattggaaggataaaatagactaagagagattgacag 564
Query: 365 aaagtttcccaatctgttggtgacttttttgtcttattgacagtgtcttttgccttacag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aaagtttcccaatctgttggtgacttttttgtcttattgacagtgtcttttgccttacag 624
Query: 425 aagctttgcaattttatgaggttc-atttgtcaatgctcgatcttacagcacaagccatt 483
|||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 625 aagctttgcaattttatgaggttccatttgtcaatgctcaatcttacagcacaagccatt 684
Query: 484 gctgttctatccaggatttttttcccctgtgcccatatcttctagacttttccccacttt 543
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 685 gctgttctattcaggatttttt-cccctgtgcccatatcttctagacttttccccacttt 743
Query: 544 ctcctctataagtttcagtgtctctggttttatgttaagttccttgatccacttggacct 603
||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 744 ctcctctataagtttcagtgtctctggttttatgtggagttccttgatccacttagacct 803
Query: 604 gaccttagtacaaggagatgagaatgaatcaattcacattcttctacatgataatcgcca 663
||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 804 gaccttagtacaaggagatgagaatgaatcaattcgcattcttctacatgataaccgcca 863
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space: 687609
Effective search space used: 687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no451_b06.g1 MSMg01no451_b06.g1 CHROMAT_FILE:
MSMg01no451_b06.g1 PHD_FILE: MSMg01no451_b06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:12 2005
(156 letters)
>mm_chr18_28889094_28889649
Length = 556
Score = 300 bits (155), Expect = 3e-86
Identities = 155/155 (100%)
Strand = Plus / Minus
Query: 1 cactagagaacgctaaggtacccactctgtcatacatgtgaagatatggatagatacagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 cactagagaacgctaaggtacccactctgtcatacatgtgaagatatggatagatacagt 296
Query: 61 ttcaaatgaagggtctggaggagtgctcttaatcttgatttcacaggaccacagatttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ttcaaatgaagggtctggaggagtgctcttaatcttgatttcacaggaccacagatttaa 236
Query: 121 gattaaagaaacaacgaagtagtttaagtaattca 155
|||||||||||||||||||||||||||||||||||
Sbjct: 235 gattaaagaaacaacgaagtagtttaagtaattca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 156
Length of database: 556
Length adjustment: 8
Effective length of query: 148
Effective length of database: 548
Effective search space: 81104
Effective search space used: 81104
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
