NNNNAACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTTTGTTCTACTCTGAGCCCCATTTTTTAATGGGGTTATTT
GATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAG
TCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTG
GTCTTTTGGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGT
TTCATTAGGTCCCATTTTTCAATTCTCAATCTTACAGCACAAGCCATTGG
TGTTCTATTCAGGAATTTTTCCCCTGTTCCCATATCTTCAAGGCTTTTCC
CCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCC
TTGATCCACGTAGTTTTGACCTTAGTACAAGGAGATAGGTATGGATCGAT
TCGCATTCTTCTACATGATAACAACCAGTTGTGCCAGCACCAATTGTTGA
AAATGCTGTCTTTCTTCCACTGGATGGTTTTATCTCCCTTGTCGAAGATC
AAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTTTTCAATTCTATTCCA
TTGGTCTACTTGTCTGTCATACCAGTACCATGCATTTTTTATCACAATTG
CTCTGTAGTAAAACTTTAGGTCAGGCATGGGGATTCCACCAGAGGTTCTT
TTATCCTTGAGAAGAGTTTTTGCTATCCTAAGGTTTTTGTTATTCCAGAT
GAATTTGC

TTTTTACGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAGTTCTATAAGATGAC
AGCTGCTCATGCAAAAGTATTGTTTTCAAAGAAATTTAAAGCTGAACATA
TTTAAAATGGACAGATCTGTCCTGGAATAGCTGTGTTTCTCGTATCACTG
GTTTGATGATCATTTTTATTACATTTCCAATGTGTAGTTTGTTTGTGTCT
GGGCAGTTTTTCCTTCAACCTGAATTTGTTCTCAGAACATTTAACAATAT
CCCAGTATAATCTAAGCAGGATTGTTGGGCTTGCCTTACACTATTGGTTC
TTTATAAAAAGTAGATGTTGGATTGATTTTTCTTCCTGAACTTCAAAATA
GTAATATACCTTAAAATGAGGGAGAGAGGAGAGAGGGAGCGAGCAATAAA
AGAATAAAGGGCAACTGCAGACCTCCTTCATCTCCTTTCATCTCTTTTCT
TTAAATAATAATTTCCTATGAACAGTTAGAGACATTTTCATGGCTGTTAA
GCTGTATACAATTAGGTATTATAATATCTCTGAAAGCAGAATGCTTCCTA
AAGTTACAATTGACGGTGCATTTTGTTTCTTGATGATGTTTAAAATCACA
GTGAGCTTTACAATTGATGATATTTTATCTTAGTGAAAGTCCCCAGCTAA
TACGGTTAACATAATAAATAATTAGGAACCAATATGCAAAAAAAGACAAT
GGATAGTCT

Query= MSMg01no452_h22.g1 MSMg01no452_h22.g1 CHROMAT_FILE:
MSMg01no452_h22.g1 PHD_FILE: MSMg01no452_h22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:04 2005
         (615 letters)



>mm_chr18_49297895_49298909
          Length = 1015

 Score = 1166 bits (603), Expect = 0.0
 Identities = 612/615 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   agagttctataagatgacagctgctcatgcaaaagtattgttttcaaagaaatttaaagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 agagttctataagatgacagctgctcatgcaaaagtattgttttcaaagaaatttaaagc 756

                                                                       
Query: 61  tgaacatatttaaaatggacagatctgtcctggaatagctgtgtttctcgtatcactggt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 tgaacatatttaaaatggacagatctgtcctggaatagctgtgtttctcgtatcactggt 696

                                                                       
Query: 121 ttgatgatcatttttattacatttccaatgtgtagtttgtttgtgtctgggcagtttttc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 ttgatgatcatttttattacatttccaatgtgtagtttgtttgtgtctgggcagtttttc 636

                                                                       
Query: 181 cttcaacctgaatttgttctcagaacatttaacaatatcccagtataatctaagcaggat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 cttcaacctgaatttgttctcagaacatttaacaatatcccagtataatctaagcaggat 576

                                                                       
Query: 241 tgttgggcttgccttacactattggttctttataaaaagtagatgttggattgatttttc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 tgttgggcttgccttacactattggttctttataaaaagtagatgttggattgatttttc 516

                                                                       
Query: 301 ttcctgaacttcaaaatagtaatataccttaaaatgagggagagaggagagagggagcga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 515 ttcctgaacttcaaaatagtaatataccttaaaatgagggagagaggagagagagagcga 456

                                                                       
Query: 361 gcaataaaagaataaagggcaactgcagacctccttcatctcctttcatctcttttcttt 420
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gcaataaaagaataaagggcagctgcagacctccttcatctcctttcatctcttttcttt 396

                                                                       
Query: 421 aaataataatttcctatgaacagttagagacattttcatggctgttaagctgtatacaat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 aaataataatttcctatgaacagttagagacattttcatggctgttaagctgtatacaat 336

                                                                       
Query: 481 taggtattataatatctctgaaagcagaatgcttcctaaagttacaattgacggtgcatt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 taggtattataatatctctgaaagcagaatgcttcctaaagttacaattgacggtgcatt 276

                                                                       
Query: 541 ttgtttcttgatgatgtttaaaatcacagtgagctttacaattgatgatattttatctta 600
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 275 ttgtttcttgatgatgtttaaaatcacagtgagctttacaattgatgatgttttatctta 216

                          
Query: 601 gtgaaagtccccagc 615
           |||||||||||||||
Sbjct: 215 gtgaaagtccccagc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1015
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1005
Effective search space:   608025
Effective search space used:   608025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)