NCTCTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCCATAAGGTTTCAGACAACAGCTTACGAATCAATCCATTCTGT
ATGGCTGGCATATAAGCAGATGATAATTTTAAAATGCTTAATGACCAAGG
AGTATGGTGATTTTTATATTATACAGTTAGCACTACCATATGCTGTGCAT
ACGAGATGTCAAACATCTGGGCACGTTAGAGAATCTGGATGAATGATTGA
ATATGTTTTCATCTTAATCGAGATGTCTTGGCATCAAGTAATCTAACCCC
AAGGTTAGCCTGCTACACTTGGGGTCTCTTCTGCTTTTATTCTCAGATGT
GGCAAAATGCTAAACCGTCACAGATGAGTGATGGCTACTCAGCATGTCAT
CATAACTCCAGGGAATTTCCTTCAGCCAAAATTCTTTTGAAAGGTCTTCC
CTTCTCCCAGATGGTGCATATATGACAAAATGTGTTGTAGCATGCTGTTG
AAAGCAGAGTCAGAAGAAAAGTCCAAGGAGGGAAACAGTAACAAAGCCAA
CATTCCTTTGTGGAACCAGAGGCATCAGACAGCTGTCTGAGGATTAACAT
AATTTGATGTCTTTTTCCTCTTCCTTTGCTTTTAAGCATCTTTTCTCCAT
ATCTGAGGCCCAGGTTTGGTCTTGTATTCTGTGACACTGTGAACACTCTT
TGAAGGCTAAGTGCTCCCAACACATGAACCCTAGTAACTGAACAACACTT
TATTTCATGACTCCAC

CCATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAAAATGAATGACTGAGA
AGCACCTGAAAAAATTTTCAACATCTTAATCAACAGGGAAATGCAAATCA
AAACAACACTGAGATTCCACTTCACACCAGTCAGAATGGCTAAAATCAAA
AATTCAGGTGACAGTAAATGCTGGCGAGGATGTGGAGAAAGAGGAACACT
CCTCCATTCTTGGTGAGATTGCAAGCTTGTACAACCACCCTGGAAATCAG
TCTGGTGCTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCTGCA
ATACCTCTCCTGGGCATATATCCAGAAGATGTTCCAACTGGTAAGAAGGA
CACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCT
GGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGG
TACATTTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTAT
GAAATGTCTATCATCCTGAGTGAGATAACCCAATCACAAAAGACCTCACA
CAATATGTACTCACTGATAAGTGGATATTAGCCCAGATACTTAAAATACC
CAAGATATAAGATACAATTTGTGAAACTCATGAAACTTAAGAAAAACGAA
GTCCAACGTGTGGACACTTTGCCCCTTCTTAGAATTGGGAACAAACACCC
ATGGAAGGAC

Query= MSMg01no452_i04.b1 MSMg01no452_i04.b1 CHROMAT_FILE:
MSMg01no452_i04.b1 PHD_FILE: MSMg01no452_i04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:05 2005
         (635 letters)



>mm_chr18_40290245_40291279
          Length = 1035

 Score = 1212 bits (627), Expect = 0.0
 Identities = 633/635 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   acaacagcttacgaatcaatccattctgtatggctggcatataagcagatgataatttta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 acaacagcttacgaatcaatccattctgtatggctggcatataagcagatgataatttta 776

                                                                       
Query: 61  aaatgcttaatgaccaaggagtatggtgatttttatattatacagttagcactaccatat 120
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 775 aaatgcttaatgaccaaggagtatggtgatttttatattatccagttagcactaccatat 716

                                                                       
Query: 121 gctgtgcatacgagatgtcaaacatctgggcacgttagagaatctggatgaatgattgaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 gctgtgcatacgagatgtcaaacatctgggcacgttagagaatctggatgaatgattgaa 656

                                                                       
Query: 181 tatgttttcatcttaatcgagatgtcttggcatcaagtaatctaaccccaaggttagcct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 tatgttttcatcttaatcgagatgtcttggcatcaagtaatctaaccccaaggttagcct 596

                                                                       
Query: 241 gctacacttggggtctcttctgcttttattctcagatgtggcaaaatgctaaaccgtcac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 gctacacttggggtctcttctgcttttattctcagatgtggcaaaatgctaaaccgtcac 536

                                                                       
Query: 301 agatgagtgatggctactcagcatgtcatcataactccagggaatttccttcagccaaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 agatgagtgatggctactcagcatgtcatcataactccagggaatttccttcagccaaaa 476

                                                                       
Query: 361 ttcttttgaaaggtcttcccttctcccagatggtgcatatatgacaaaatgtgttgtagc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ttcttttgaaaggtcttcccttctcccagatggtgcatatatgacaaaatgtgttgtagc 416

                                                                       
Query: 421 atgctgttgaaagcagagtcagaagaaaagtccaaggagggaaacagtaacaaagccaac 480
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 415 atgctgttgaaagcagagtcagaagaaaagtccaaggagggaaacggtaacaaagccaac 356

                                                                       
Query: 481 attcctttgtggaaccagaggcatcagacagctgtctgaggattaacataatttgatgtc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 attcctttgtggaaccagaggcatcagacagctgtctgaggattaacataatttgatgtc 296

                                                                       
Query: 541 tttttcctcttcctttgcttttaagcatcttttctccatatctgaggcccaggtttggtc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tttttcctcttcctttgcttttaagcatcttttctccatatctgaggcccaggtttggtc 236

                                              
Query: 601 ttgtattctgtgacactgtgaacactctttgaagg 635
           |||||||||||||||||||||||||||||||||||
Sbjct: 235 ttgtattctgtgacactgtgaacactctttgaagg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1035
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1025
Effective search space:   640625
Effective search space used:   640625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)