NAACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCCATAGTTACACCATGGCACATGGCACACACACACTCACATG
CACACACACTAAATGTTTCTAAATAAATAAATCACAAAGCCCTGCAGATT
TTTAAGTACATAGATAAACTATGTAGATATGGAAAGACCCCTGGGCTTTG
GGCAAAGCTGAATATTTCAACATGGATGTTAATTCCAAATGTGTCTGACT
TTCCCAAACTGCACAGCTGTTCTGAGGATTGTTGTAGAACAGCATTCACT
TAGGCACAAAACTTTCAGGAACAAGATGGAAAACCTGGCTCTCTGGCCAT
TTCTCGGTTACCCTGTTGTGTTTAGAGGTAGACACACTTTAAATCTCGAG
CTAGCATTTTTCTTCCCCCGCCCCCAGTCCAATCCTATAACTTGTTCCAT
TAGATGTACAGGATCAAAGGACACATTCTAATTTTCAGATTAGCTCAAGA
AAAACATGAATAGGAGGCTTTAAGTACTGCCAACAATAACTTTCGTAATG
CATTCCATACCAAGCGTAAATCCGAAGCTGTGTGCTCCGTGGGCTGTTTC
CCATTATCTTGCCCTGGCATCCTCATTCAGTAGCACAGACAGTGAAAGAA
GAACCCCACCGTACCAAGAAAAATCTAAGACATAGGGGAAAGTACCTCTT
CCTGGTTAAAAAGCCACCTAAGTCTAAAAAAATTCCCTAGACACATTTGG
A

CCCTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAAT
GGCAGAGAAGCACTTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAA
TGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCT
AAGATCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAG
AGGAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCT
GGAAATCAGTCTGGCGGTTCCTCAGAAAACTGGACATAGTACTACCGGAG
GATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACAGG
TAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAG
CCAGAAGCTGGAAAGAACCTAGATGCCCCTCAACAGAGGAATGGATACAG
AAAATGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAA
TGAATTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCC
TGAGTGAGGTAACACATTCACAAAGAAACTCACACAATATGTATTCACTG
ATAAGTGGATATTAGCCCCAAACCTAGGATACCCAAGATATAAGATATAA
TTTGCTAAACACATGAAACTCAAGAAGAATGAAGACTGAAGTGTGGACAC
TA

Query= MSMg01no452_k01.b1 MSMg01no452_k01.b1 CHROMAT_FILE:
MSMg01no452_k01.b1 PHD_FILE: MSMg01no452_k01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:14 2005
         (526 letters)



>mm_chr18_66361893_66362816
          Length = 924

 Score =  922 bits (477), Expect = 0.0
 Identities = 511/523 (97%), Gaps = 4/523 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccatagttacaccatggcacatggcacacacacactcacatgcacacacactaaa 64
           |||||| |||| ||||||||||||||||||||||||||  ||||||||||||||||||||
Sbjct: 205 gaattctataggtacaccatggcacatggcacacacac--tcacatgcacacacactaaa 262

                                                                       
Query: 65  tgtttctaaataaataaatcacaaagccctgcagatttttaagtacatagataaactatg 124
           |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 263 tgtttctaaataaataaatcacaaagccctgcagatttttaagtccgtagataaactatg 322

                                                                       
Query: 125 tagatatggaaagacccctgggctttgggcaaagctgaatatttcaacatggatgttaat 184
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tagatatggaaagactcctgggctttgggcaaagctgaatatttcaacatggatgttaat 382

                                                                       
Query: 185 tccaaatgtgtctgactttcccaaactgcacagctgttctgaggattgttgtagaacagc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tccaaatgtgtctgactttcccaaactgcacagctgttctgaggattgttgtagaacagc 442

                                                                       
Query: 245 attcacttaggcacaaaactttcaggaacaagatggaaaacctggctctctggccatttc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 443 attcacttaggcacaaaactttcaggaacaagatggaaaacctggctctctggccatctc 502

                                                                       
Query: 305 tcggttaccctgttgtgtttagaggtagacacactttaaatctcgagctagcatttttct 364
           ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 503 tcggttaccctgttgtgtttagaggtagatacactttaaatctcaagctagcatttttct 562

                                                                       
Query: 365 tccccc-gcccccagtccaatcctataacttgttccattagatgtacaggatcaaaggac 423
            ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 -ccccctgcccccagtccaatcctataacttgttccattagatgtacaggatcaaaggac 621

                                                                       
Query: 424 acattctaattttcagattagctcaagaaaaacatgaataggaggctttaagtactgcca 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 acattctaattttcagattagctcaagaaaaacatgaataggaggctttaagtactgcca 681

                                                      
Query: 484 acaataactttcgtaatgcattccataccaagcgtaaatccga 526
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 acaataactttcgtaatgcattccataccaagcgtaaatccga 724


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 924
Length adjustment: 10
Effective length of query: 516
Effective length of database: 914
Effective search space:   471624
Effective search space used:   471624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)