Query= MSMg01no457_f15.b1 MSMg01no457_f15.b1 CHROMAT_FILE:
MSMg01no457_f15.b1 PHD_FILE: MSMg01no457_f15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:31 2005
(478 letters)
>mm_chr18_84954608_84955484
Length = 877
Score = 818 bits (423), Expect = 0.0
Identities = 462/475 (97%), Gaps = 1/475 (0%)
Strand = Plus / Minus
Query: 4 ggaattccatggtttttctgaaaatagataacgctcctctaagcttctcattttgctccc 63
||||||||||||| | |||||||||||||| |||||||||| ||| |||||||| |||
Sbjct: 677 ggaattccatggtaactgtgaaaatagataacactcctctaagattcacattttgccccc 618
Query: 64 ttaaaaaaactaaaccattttgttggggaaaatatcaaagatttaaagaagtttatatgt 123
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tt-aaaaaactaaaccattttgttggggaaaatatcaaagatttaaagaagtttatatgt 559
Query: 124 atacttttatgtatagattatttaaagaataatatctgttacaactcagcaaatgataat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 atacttttatgtatagattatttaaagaataatatctgttacaactcagcaaatgataat 499
Query: 184 gagtgataatgaggaataaatatgaatgaattaggaataataacagtgaacctgcccttt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gagtgataatgaggaataaatatgaatgaattaggaataataacagtgaacctgcccttt 439
Query: 244 tctggttacaccagcttctggagagccgtcattcatatcaaatctcagcacagcagaata 303
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 438 tctggttacaccagcttctggagagccgtcattcagatcaaatctcagcacagcagaata 379
Query: 304 gctaagtctcaggcgctgtggtcctatccacaccacagctgtcttgcaacactggttaat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gctaagtctcaggcgctgtggtcctatccacaccacagctgtcttgcaacactggttaat 319
Query: 364 catattgcaaagtaggcaacttcagtcctagcatgaagaacaggaaaagcagtagccaat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 318 catattgcaaagtaggcaacttcagtcctagcatgaagaacaggaaaagcagttgccgat 259
Query: 424 ggaaatgcagagaagaaatctggctgtctgtctggatgtgacatggctactgctt 478
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 258 ggaaatgcagagaagaaatctgtctgtctgtctggatgtgacatggctactgctt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 877
Length adjustment: 10
Effective length of query: 468
Effective length of database: 867
Effective search space: 405756
Effective search space used: 405756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no457_f15.g1 MSMg01no457_f15.g1 CHROMAT_FILE:
MSMg01no457_f15.g1 PHD_FILE: MSMg01no457_f15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:31 2005
(173 letters)
>mm_chr18_84802428_84803000
Length = 573
Score = 335 bits (173), Expect = 1e-96
Identities = 173/173 (100%)
Strand = Plus / Plus
Query: 1 tttcctttgaaagatggctaggcctcaggataagttttctttcaagaatgttacttttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttcctttgaaagatggctaggcctcaggataagttttctttcaagaatgttacttttca 260
Query: 61 aatgtgttcaatctgctttggagttactcaaagtctttgatctttcagcaaaatgggttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatgtgttcaatctgctttggagttactcaaagtctttgatctttcagcaaaatgggttt 320
Query: 121 tagggtttttctatcccggacatgggatgctgcctttaaagttttgatccctt 173
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagggtttttctatcccggacatgggatgctgcctttaaagttttgatccctt 373
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 173
Length of database: 573
Length adjustment: 8
Effective length of query: 165
Effective length of database: 565
Effective search space: 93225
Effective search space used: 93225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
