Query= MSMg01no459_c12.b1 MSMg01no459_c12.b1 CHROMAT_FILE:
MSMg01no459_c12.b1 PHD_FILE: MSMg01no459_c12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:58 2005
(498 letters)
>mm_chr18_70205106_70205996
Length = 891
Score = 855 bits (442), Expect = 0.0
Identities = 479/494 (96%), Gaps = 7/494 (1%)
Strand = Plus / Minus
Query: 5 gaattcattcctttacttatgaagagtgtagggaaaagtttcttgtccagggtgtttggt 64
||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 gaattcattccattaattatgaagagtgtagggaaaagtttcttgtccagggtgtttggt 632
Query: 65 ccttcagtgggtagaatcttaacagcctgcagatgtggctctctctacagactcgagaag 124
|||||||||||||||||||||||||||||||||||||||||||||| | | |||||
Sbjct: 631 ccttcagtgggtagaatcttaacagcctgcagatgtggctctctct---g---c-agaag 579
Query: 125 ccctgggctgtgtgtttcctgtgtcactgaatctggtggtgtggtttctctgtgaaagac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 ccctgggctgtgtgtttcctgtgtcactgaatctggtggtgtggtttctctgtgaaagac 519
Query: 185 cacaggatagcaactgagtggctccaaagagaactctcgatctgctataatgttctctct 244
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 518 cacaggatagcaactgagtggctccaaagagaactctcgctctgctataatgttctctct 459
Query: 245 ggctcccagcagtggtttcaattaatgtatctcaaggctcagcctcttggaaacccctat 304
|||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 458 ggctcccaacagtggtttcaattaatgtatctcaaggctcggcctcttggaaacccctat 399
Query: 305 ccttttaaagtcctctttatcccttaagtagagctgtggatgagaccagggaagcagttc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ccttttaaagtcctctttatcccttaagtagagctgtggatgagaccagggaagcagttc 339
Query: 365 ccagaagggcctgggttagagttactgtcatgaaatgcagtctgtaggtttggcctaagt 424
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 338 ccagaagggcctgggttagagttactgtcgtgaaatgcagtctgtaggtttggcctaagt 279
Query: 425 aggctagagaactaaggtgggttctcaggtcactccagaagacattcacaaaactaagga 484
|||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 278 aggctagagaactaaggtgggttctcaggtcaatccagaagacattcacataactaagga 219
Query: 485 tatcaacttttcac 498
||||||||||||||
Sbjct: 218 tatcaacttttcac 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 891
Length adjustment: 10
Effective length of query: 488
Effective length of database: 881
Effective search space: 429928
Effective search space used: 429928
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no459_c12.g1 MSMg01no459_c12.g1 CHROMAT_FILE:
MSMg01no459_c12.g1 PHD_FILE: MSMg01no459_c12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:58 2005
(245 letters)
>mm_chr18_70025403_70026047
Length = 645
Score = 429 bits (222), Expect = e-125
Identities = 237/242 (97%)
Strand = Plus / Plus
Query: 1 tctggcgaggctgtttctggaagtgattaggacgccccgtgttgctacgcactttctccc 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 tctggcgaggctgtttctggaagtgattaggacgccccgtgctgctacgcactttctccc 260
Query: 61 ccgtgcacagcacgtgtgatcaattagtagtttgattggtgcctggctggaggagtgagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccgtgcacagcacgtgtgatcaattagtagtttgattggtgcctggctggaggagtgagc 320
Query: 121 ctttgtagtcatttcaggtgtctgtagttcttagaacaatagcgtaggatgtgtggtttg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 ctttgtagtcatttcaggtgtctgtagttcttagaacaatagcgtaggatgtgtggcccg 380
Query: 181 aggattttgaaactaggggaatatggtagctctgggcgaggacataaatttttaatttga 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggattttgaaactaggggcatatggtagctctgggcgaggacataaatttttaatttga 440
Query: 241 gg 242
||
Sbjct: 441 gg 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
