Query= MSMg01no459_m20.b1 MSMg01no459_m20.b1 CHROMAT_FILE:
MSMg01no459_m20.b1 PHD_FILE: MSMg01no459_m20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:51 2005
(417 letters)
>mm_chr18_44892909_44893724
Length = 816
Score = 775 bits (401), Expect = 0.0
Identities = 413/417 (99%), Gaps = 1/417 (0%)
Strand = Plus / Minus
Query: 1 tcaaccctcttgtttatttccttcatctagtttagacaagccaagataataagctgctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tcaaccctcttgtttatttccttcatctagtttagacaagccaagataataagctgctga 557
Query: 61 atattattttaattgttttgtagaaggttaaagatgctagcctcagctgtgcttccataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 atattattttaattgttttgtagaaggttaaagatgctagcctcagctgtgcttccataa 497
Query: 121 ctaaattattaactgccaaagggcacacgcttcgccttttatattaaatttggtgcagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ctaaattattaactgccaaagggcacacgcttcgccttttatattaaatttggtgcagat 437
Query: 181 gagaacaatagaagctgtagctgggagagaattataaagtgtttattccagctgcccctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gagaacaatagaagctgtagctgggagagaattataaagtgtttattccagctgcccctc 377
Query: 241 tagttgtctctctgaaagccctcccattagcatccccccaccccccagcctgtggagaag 300
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 376 tagttgtctctctgaaagccctcccattagcatcccccca-ccccaagcctgtggagaag 318
Query: 301 cacatcaaggattgttgaacttgctggtgcacagcgggatgtttaaaaaaatccactaat 360
|| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 caaatcaaggattgtagaacttgctggtgcacagcgggatgtttaaaaaaatccactaat 258
Query: 361 ggcggtggtgcaataaacacacttcagtgtgaaaaatgcacttcctggcttctcttt 417
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ggcggtggtgcaataaacacacttcagtgtgaaaaatgcacttcctggcttctcttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 816
Length adjustment: 9
Effective length of query: 408
Effective length of database: 807
Effective search space: 329256
Effective search space used: 329256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no459_m20.g1 MSMg01no459_m20.g1 CHROMAT_FILE:
MSMg01no459_m20.g1 PHD_FILE: MSMg01no459_m20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:51 2005
(392 letters)
>mm_chr18_44719070_44719861
Length = 792
Score = 706 bits (365), Expect = 0.0
Identities = 385/392 (98%)
Strand = Plus / Plus
Query: 1 cttcactgatattacatgcagtttattctggctccagacagagactacagaaatccccta 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 cttcactgatattacatgcagtttattctggctccagacagagactatagaaatccccta 260
Query: 61 ggacactggttctcaacctgtgggtcgtaactcagttagagaccccgtgtctccaaaaaa 120
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 261 ggacactggttctcaacctgtgggtcgcaactcagttagagaccctgtgtctccaaaaaa 320
Query: 121 tatttacattatgattcataacagtagaaaaattagttatggagtaagaacaaaaataat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatttacattatgattcataacagtagaaaaattagttatggagtaagaacaaaaataat 380
Query: 181 gttttggtgtgggatcaccacaccatggggagctatgttaaagggtcacagcactaaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttttggtgtgggatcaccacaccatggggagctatgttaaagggtcacagcactaaaaa 440
Query: 241 ggttgatattgggactgtttcaacatccaacctctgagggctgacaactattagattctt 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggttgagattgggactgtttcaacatccaacctctgagggctgacaactattagattctt 500
Query: 301 gtggtcaaaatcaggccagagttgtgcaagcagaataaaccctttccatcccaacttgct 360
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtggccaaaatcaggccagagttgtgcaagcagaataaaccctttccatcccaacttgct 560
Query: 361 ttttggncatgatgtttcattgcagcagtgga 392
|||||| |||||||||||||| ||||||||||
Sbjct: 561 ttttggtcatgatgtttcattacagcagtgga 592
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 792
Length adjustment: 9
Effective length of query: 383
Effective length of database: 783
Effective search space: 299889
Effective search space used: 299889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
