Query= MSMg01no460_h21.b1 MSMg01no460_h21.b1 CHROMAT_FILE:
MSMg01no460_h21.b1 PHD_FILE: MSMg01no460_h21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:45 2005
(364 letters)
>mm_chr18_55116166_55116929
Length = 764
Score = 534 bits (276), Expect = e-156
Identities = 323/358 (90%), Gaps = 31/358 (8%)
Strand = Plus / Minus
Query: 17 cccaccttctctaggcttggctgtgtctctcccttggagttcagccatggcctcttaaaa 76
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 760 cccaccttctctaggcttggctgtgtctctcccttggagttcagccatgggctcttaaaa 701
Query: 77 catatctttctcctctcctctctctctctcctctctctctctctctctctctctctctct 136
||||||||||||||||| ||||||||||||||||||||||
Sbjct: 700 catatctttctcctctc---------------------ctctctctctctctctctctct 662
Query: 137 ctctctctctctctctctctctctctctcacgctctccttccccccccc----------g 186
||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 661 ctctctctctctctctctctctctctctcacgctctcctccccccccccgtgtgtgtgtg 602
Query: 187 tgtgtgtgtgtgtgtgtgtgtgtgtctgtctgtctgtctccaactttgctctctctcata 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgtgtgtgtgtgtgtgtgtgtgtgtctgtctgtctgtctccaactttgctctctctcata 542
Query: 247 cattttcatttagagtccattatgggctttaccgggtgagccagataatttttctatacc 306
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cattttcatttagagtccaacatgggctttaccgggtgagccagataatttttctatacc 482
Query: 307 cctacttcagaaagaagcccacactttttttttaaacccctaggttctcatccttgcc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cctacttcagaaagaagcccacactttttttttaaacccctaggttctcatccttgcc 424
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 85
Number of extensions: 29
Number of successful extensions: 29
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 764
Length adjustment: 9
Effective length of query: 355
Effective length of database: 755
Effective search space: 268025
Effective search space used: 268025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no460_h21.g1 MSMg01no460_h21.g1 CHROMAT_FILE:
MSMg01no460_h21.g1 PHD_FILE: MSMg01no460_h21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:45 2005
(468 letters)
>mm_chr18_54946869_54947736
Length = 868
Score = 758 bits (392), Expect = 0.0
Identities = 439/468 (93%), Gaps = 21/468 (4%)
Strand = Plus / Plus
Query: 1 ttatttaacccattcactttcccagctctgtggtacatgcagggcagttacaaaagtaaa 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttatttaacccattcactttccaagctctgtggtacatgcagggcagttacaaaagtaaa 260
Query: 61 cctaagggtaataaatataaatgaagcccacggcttagcactttcctcagtgccatgtgt 120
||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 261 cctaagggtaataaatataaatgaagcccacagcctagcactttcctcagtgccatgtgt 320
Query: 121 gacaccaccaatgtgcagcaccttgagagtcaaagcaatggcagccaacctctgcagaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacaccaccaatgtgcagcaccttgagagtcaaagcaatggcagccaacctctgcagaga 380
Query: 181 ggagtcctgccgggtactccccctagaagatatatcaactcccctagaagggggagtcta 240
|| |||||||||| ||||||||||||||| ||||||||||
Sbjct: 381 ggggtcctgccggatactccccctagaag---------------------ggggagtcta 419
Query: 241 ggcagagttttgtagggcagtggcaatttgttaggtggatatacagaagtgtccacgata 300
||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||
Sbjct: 420 ggcagagttttgtagggcagtggcaatttgtcaggtggatatacagaggtgtccacaata 479
Query: 301 catgaagtaaatgcacagagaactgaaatagcaaaagaatagcaaagagaagttggggta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 catgaagtaaatgcacagagaactgaaatagcaaaagaatagcaaagagaagttggggta 539
Query: 361 agaaatgtctttattggttacattaatatcttactgtgatgtctatctatgtatgcatga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 agaaatgtctttattggttacattaatatcttactgtgatgtctatctatgtatgcatga 599
Query: 421 tgtagatttaagtcataaaccatcctgccagtagggtactcttgaaga 468
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 tgtagatttaagtcataaaccatcctgccagtagggtactcttgaaga 647
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 868
Length adjustment: 10
Effective length of query: 458
Effective length of database: 858
Effective search space: 392964
Effective search space used: 392964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
