Query= MSMg01no461_i13.b1 MSMg01no461_i13.b1 CHROMAT_FILE:
MSMg01no461_i13.b1 PHD_FILE: MSMg01no461_i13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:10 2005
(129 letters)
>mm_chr18_31135547_31136075
Length = 529
Score = 250 bits (129), Expect = 3e-71
Identities = 129/129 (100%)
Strand = Plus / Minus
Query: 1 atgttaaacgcacagatgatatgtaaagcttaagctggagaaagactcatttaccacagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 atgttaaacgcacagatgatatgtaaagcttaagctggagaaagactcatttaccacagt 270
Query: 61 gacagggttttgctttcagattcctttatcagaatgtggtttgggaaatgttcattacgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gacagggttttgctttcagattcctttatcagaatgtggtttgggaaatgttcattacgc 210
Query: 121 attgttaga 129
|||||||||
Sbjct: 209 attgttaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 129
Length of database: 529
Length adjustment: 8
Effective length of query: 121
Effective length of database: 521
Effective search space: 63041
Effective search space used: 63041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no461_i13.g1 MSMg01no461_i13.g1 CHROMAT_FILE:
MSMg01no461_i13.g1 PHD_FILE: MSMg01no461_i13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:10 2005
(599 letters)
>mm_chr18_30938260_30939258
Length = 999
Score = 1035 bits (535), Expect = 0.0
Identities = 586/613 (95%), Gaps = 19/613 (3%)
Strand = Plus / Plus
Query: 1 actttgcagaccaggctggcctcgaactcaga------------tctgatctctaacttt 48
|||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 189 actttgcagaccaggctggcctcgaactcagaaatctgcctgcctctgatctctaacttt 248
Query: 49 taactgtatcagttattctgcttttgtttcttttggttacagaaacttatatttcttata 108
||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 249 taactatatcagttattctgcttttgtttctcttggtttcagaaacttatatttcttata 308
Query: 109 ttattaaacaagataaacagtgagaattcctacaatttctaaattgtgacaattgaaaca 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ttattaaacaagataaacagtgagaattcctacaatttctaaattgtgacaattgaaaca 368
Query: 169 tccaattttaaatataattattaatataggatagagaaaacatttttatcaaaatttata 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tccaattttaaatataattattaatataggatagagaaaacatttttatcaaaatttata 428
Query: 229 aaatttagaccaagatttta--ttgattatggtataaatgacatgcaaaagataagattt 286
||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||
Sbjct: 429 aaatttagaccaaga----aaattgattacggtataaatgacatgcaaaagataagattt 484
Query: 287 ttaaaattttaatctgggtttttattgtacagtgtaaccattagtatttgaagttgaaat 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ttaaaattttaatctgggtttttattgtacagtgtaaccattagtatttgaagttgaaat 544
Query: 347 gatttttcagataaaattttgaatgaaagattgaaaagtttgctgtgtaaatttaaaaaa 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gatttttcagataaaattttgaatgaaagattgaaaagtttgctgtgtaaatttaaaaaa 604
Query: 407 aacatacaaatgaaaatttaattaaatccatagaatccaatctggacaataaacaagaat 466
| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 a-catagaaatgaaaatttaattaaatccatagaatccaatctggacaataaacaagaat 663
Query: 467 atttcaccaatattagcaaaattagaatgaaaatatctcaatgatttcagacttaaatgt 526
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 664 atttcaccaatattagcaaaattagaatgaaaatatctcaatgatttcagactcaaatgt 723
Query: 527 aaatatcagtagaagagcttacagcatgctcccaactgtgaaaaggagcccaggtttcca 586
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 aaatatcagtagaggagcttacagcatgctcccaactgtgaaaaggagcccaggtttcca 783
Query: 587 cgggcaattttga 599
| |||||||||||
Sbjct: 784 caggcaattttga 796
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space: 582521
Effective search space used: 582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
