TCTCTTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCCCCCTAAAGTCACCTTTATTTGGGATACTGTCCAATCAA
TGGCCCGCTAGCAAATGGCTAGATAGTTAGATTCTGGGCATCATCAACTT
CTCCCAGAAGCCACCTCTGGGCGGCAACATTCCCTCCGCCTAGGGAAAAA
AGTATGTCCCATGACAGCACCAGGTGCTCCCCTAGGGAACGGCACCATGG
CTCTCTCTTTATTGTCCGGTCATACACACACACCCCACACCAAGCAAGCT
GTTTCACATCATAACAGTATAGCAGCGTGGCTTGCCCAACACCTAGAAGG
GAGTAGGTCTTTTGTAATAATTTTTAAAAGGCCAATTTTTCCTTGGCTGA
GAGGCCATTTCCAATTCCTTTTGTTGGCATCTTTGGACTGTTCCCTAAAC
CACACCAACGCCGACACTTCCTTCCTCCCTCTTGTGGCAGGGGCAGACCC
GGAACAGAGCATGGGCATCTCCTGGGCAGCTGGGAGAGATGCATATTCTG
TGGTCCCACCCACATCTGCTGAAGCAGACTCTCCAGGGGTACCCCACAAC
GTTATAAATTACCCAGCCCTCCAGATGGGTGGCTGCCTGCTTAATGTCTT
AAGGTTTCAACTTCTGCGANGAAACAAATGCCCAAAAAAAAATTGAAGAG
GAAAGGGTTAATTTGAATTAAACTTTCCCATCACTGTTTATCAACCAATG
GAATCG

NNNCCCGATGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAGGAGTAGTCCTCGGCTGTG
CCTCTCTCTGGGAAGCAACGATCAGCGAAGACAAGACGAGAGTCTCACAA
GCATTGCACAGCTAGCTGTACCAGCAAGCCAATCTCTCTCTCCATCACTC
TGTGGGGTCCTATTTATACCTTCTAGACATCATGTGTCCTTCATGTGGCT
TGTCTTAGCACAGGTCTTACCTCAACAAGGGTCTTGCCTCAGAACCCACG
TCCAATCAGCCTGGGTCTTCAGAATCGACAAAGAAACTGCAGCACACCAC
TATTAGTTTTTTGGTGTTTCTCTCTATGGAGTCCTGACAAATGCAGCTCA
ACTATGCAGTGTAAGGTGGACCAATACATGTGTGTTGTTAGCAAAGAATC
CTTCATCACGTGTCCTTTCACATGCTTGCCTTAGTAGAACATCCACTCTT
TGATGTTTGCTTCAGGGAAACGTTCTGTCACGAGTCTGCCTGAGCCTTTT
CCACCTGTGTCCACTTTCAAATGTGTGCCCCCGCAAAACACCATCCAATT
GATTGTTTCAAAAAACCTTTACTTTTCCCCTTCAGTCAACCGCTGAAGGG
CTTCTGAAAAACAGGGTTAACCGGGAAAGGTTTATTGTAAATTTGACCAC
CCTTCAATTTCCTTGCATGGAAAGAAACCCCCCTGTTTAAATGGCCCCCC
TTAAAACCCACTCTTTAAATGGG

Query= MSMg01no462_a20.b1 MSMg01no462_a20.b1 CHROMAT_FILE:
MSMg01no462_a20.b1 PHD_FILE: MSMg01no462_a20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:54 2005
         (541 letters)



>mm_chr18_74203808_74204748
          Length = 941

 Score =  977 bits (505), Expect = 0.0
 Identities = 529/537 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccccctaaagtcacctttatttgggatactgtccaatcaatggcccgctagcaaa 64
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccccctaaagccacctttatttgggatactgtccaatcaatggcccgctagcaaa 264

                                                                       
Query: 65  tggctagatagttagattctgggcatcatcaacttctcccagaagccacctctgggcggc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tggctagatagttagattctgggcatcatcaacttctcccagaagccacctctgggcggc 324

                                                                       
Query: 125 aacattccctccgcctagggaaaaaagtatgtcccatgacagcaccaggtgctcccctag 184
           ||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 325 aacattccctctgcctaggaaaaaaagtatgtcccatgacagcgccaggtgctcccctag 384

                                                                       
Query: 185 ggaacggcaccatggctctctctttattgtccggtcatacacacacaccccacaccaagc 244
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 385 ggaacggcaccatggctctctctttattgtccggtcatccacacacaccccacaccaagc 444

                                                                       
Query: 245 aagctgtttcacatcataacagtatagcagcgtggcttgcccaacacctagaagggagta 304
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 445 aagctgtttcacatcataacagtatagcagtgtggcttgcccaacacctagaagggagta 504

                                                                       
Query: 305 ggtcttttgtaataatttttaaaaggccaatttttccttggctgagaggccatttccaat 364
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 505 ggtcttttgtaataatttttaaaaggccaatttttccttggctaagaggccatttccaat 564

                                                                       
Query: 365 tccttttgttggcatctttggactgttccctaaaccacaccaacgccgacacttccttcc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tccttttgttggcatctttggactgttccctaaaccacaccaacgccgacacttccttcc 624

                                                                       
Query: 425 tccctcttgtggcaggggcagacccggaacagagcatgggcatctcctgggcagctggga 484
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 625 tccctcttgtggcaggggcagacccggaacagagcatgggcatctcctgggcagctggaa 684

                                                                    
Query: 485 gagatgcatattctgtggtcccacccacatctgctgaagcagactctccaggggtac 541
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gagatgcatattctgtggtcccacccacatctgctgaagcagactctccaggggtac 741


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 941
Length adjustment: 10
Effective length of query: 531
Effective length of database: 931
Effective search space:   494361
Effective search space used:   494361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)