Query= MSMg01no465_m17.b1 MSMg01no465_m17.b1 CHROMAT_FILE:
MSMg01no465_m17.b1 PHD_FILE: MSMg01no465_m17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:41:02 2005
(400 letters)
>mm_chr18_59604832_59605631
Length = 800
Score = 696 bits (360), Expect = 0.0
Identities = 390/400 (97%)
Strand = Plus / Plus
Query: 1 caatgtaagcatagtcatcacatatttccaccaatttgaagactcatcttattaggaggg 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caatgtaagcatagtcatcacttatttccaccaatttgaagactcatcttattaggaggg 260
Query: 61 gctatgaagaagacaccagggaagctaggaccttgagccatagacaatgaaacaaaaata 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 gctatgaagaagacaccagggaagctaggaccttgagtcatagacaatgaaacaaaaata 320
Query: 121 gcacatgggaacagacactgaggaagcccagtgtcttggttagggtttattattcctgga 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 321 gcacatgggaacagacactgaggaagcccagtgtcttagttagggtttattattcctgga 380
Query: 181 caaaacatcatgaccaagaagaaagttggggagaaaagggtttattcagcttacacttcc 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaaacatcatgaccaagaagcaagttggggagaaaagggtttattcagcttacacttcc 440
Query: 241 atactgttgttcatcatcaaggaagtcaggactggaactcaagcaggtcaggaagcagga 300
|||||| ||||||||| |||||||||||||||||||||||||||||| || |||| ||||
Sbjct: 441 atactgctgttcatcaccaaggaagtcaggactggaactcaagcagggcatgaagaagga 500
Query: 301 gctgatgcagaggccatggagggatgttacttactggcttacttcctctggcttgctcag 360
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 501 gctgatgcagaggccatggagggatgttccttactggcttacttcctctggcttgctcag 560
Query: 361 cctgctctcttatagaacccaagactgccagcccagagat 400
||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cctgctctcttatagaacccaagactgccagcccagagat 600
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 800
Length adjustment: 9
Effective length of query: 391
Effective length of database: 791
Effective search space: 309281
Effective search space used: 309281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no465_m17.g1 MSMg01no465_m17.g1 CHROMAT_FILE:
MSMg01no465_m17.g1 PHD_FILE: MSMg01no465_m17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:41:02 2005
(448 letters)
>mm_chr18_59755489_59756339
Length = 851
Score = 795 bits (411), Expect = 0.0
Identities = 440/451 (97%), Gaps = 3/451 (0%)
Strand = Plus / Minus
Query: 1 tcttctctatatttggaaagtcatcgtgggaactgttacttgtgttcttttgtttt---t 57
|||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |
Sbjct: 468 tcttctctatatttggaaagtcattgtgggaactgttacttctgttcttttgttttttct 409
Query: 58 tcttttggaaaagcaattagatagatgcagaactttaagttgtagaatatttgacaaacc 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 tcttttggaaaagcaattagatagatgcagaactttaagttgtagaatatttgacaaacc 349
Query: 118 ccaaaaacatcttgtaatatagaatgttagttcatgtatgcctaactacagaaactaaat 177
||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 348 ccacaaacatcttgtaatataggatgttagttcatgtatgcctaactacagaaactaaat 289
Query: 178 cttgaattgaccatgactaggtagaccaaggggttatcctgcctactattggcccatcac 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 cttgaattgaccatgactaggtagaccaaggggttatcctgcctactattggcccatcac 229
Query: 238 tacttcattttcagtctcttctgcaatattcgcagataatagtagttttccccaaaggga 297
||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 228 tacttcagttccagtctcttctgcaatattcacagataatagtagttttccccaaagggg 169
Query: 298 ccataacctatgtatccacaggttccaggccactttgtcagtgacatctttgtgtcatat 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 ccataacctatgtatccacaggttccaggccactttgtcagtgacatctttgtgtcatat 109
Query: 358 ttcattaagtggatatctcaatccaatcaaaaagtaggtggttgcctccataacatttgt 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 ttcattaagtggatatctcaatccaatcaaaaagtaggtggttgcctccataacatttgt 49
Query: 418 gtcagtattgctggcaggtttatattataag 448
|||||||||||||||||||||||||||||||
Sbjct: 48 gtcagtattgctggcaggtttatattataag 18
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 851
Length adjustment: 10
Effective length of query: 438
Effective length of database: 841
Effective search space: 368358
Effective search space used: 368358
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
