Query= MSMg01no466_i21.b1 MSMg01no466_i21.b1 CHROMAT_FILE:
MSMg01no466_i21.b1 PHD_FILE: MSMg01no466_i21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:42:05 2005
(396 letters)
>mm_chr18_46880463_46881260
Length = 798
Score = 567 bits (293), Expect = e-166
Identities = 338/353 (95%), Gaps = 2/353 (0%)
Strand = Plus / Minus
Query: 1 agatgatatacacttaagtattttaatcatccttgcagctattatgacttcatataccca 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 agatgatatacacttatgtattttaatcatccttgcagctattatgacttcatataccca 494
Query: 61 aatactatttgttctaagatcacatgaataaattcctttttacttattatacagtttgct 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 aatactatttgctctaagatcacatgaataaattcctttttacttattatacagtttgct 434
Query: 121 ttctcccaccagtatcagaggatcatcaca-atc-actactccaagtcagtaagatggta 178
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 433 ttctcccaccagtatcagaggatcatcacaggtcggctactccaagtcagtaagatggta 374
Query: 179 atacaaagaccaccttatatcatcatttcaggataagcatgtacatgcgcatatacacat 238
|||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 373 atactaagaccaccttatattatcatttcaggataagcatatacatgcgcatatacacat 314
Query: 239 tctctttcacacacaaagaagaaaagaggaaaggcctgtgggggaaaacataaaatattc 298
|||| |||||||||||||| ||||||||||||||||| ||||| |||||||||||||||
Sbjct: 313 tctccctcacacacaaagaaaaaaagaggaaaggcctggggggggaaacataaaatattc 254
Query: 299 aatgattccaaggcactcaattaacatagatgagttactttgttcttttaaaa 351
|| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 aaagattccaaggcactcaattaacatagatgagttactttgttcttttaaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 396
Length of database: 798
Length adjustment: 9
Effective length of query: 387
Effective length of database: 789
Effective search space: 305343
Effective search space used: 305343
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no466_i21.g1 MSMg01no466_i21.g1 CHROMAT_FILE:
MSMg01no466_i21.g1 PHD_FILE: MSMg01no466_i21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:42:05 2005
(344 letters)
>mm_chr18_46701051_46701794
Length = 744
Score = 627 bits (324), Expect = 0.0
Identities = 339/344 (98%)
Strand = Plus / Plus
Query: 1 ctttcctgttaaataatggttcataaagtgtggttactaatctagctgtctcaacagcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttcctgttaaataatggttcataaagtgtggttactaatctagctgtctcaacagcct 260
Query: 61 ttgggagcttagaaaggcaaattcctaagccctagagaagcaacatccatgagggtatgg 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 261 ttgggagcttagaaaggcaaattcctaagccctagagaatcaacatccatgagggtatgg 320
Query: 121 cttagtaacctctgttctaacatgccctgttggtcagttttacatggactaatgtttgag 180
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 321 cttagtaacctctgttctaacctgccctgttggtcatttttacatggactaatgtttgag 380
Query: 181 aaccacagtcatagtgtgtccacacttacctcttatgaataagcattctgaggtccacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaccacagtcatagtgtgtccacacttacctcttatgaataagcattctgaggtccacag 440
Query: 241 atttgtgagattacccaagatccgctcccctactgtcatacagacagtaagacatgccac 300
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agttgtgagattacccaagatccgctcccctactgtcatacagacagtaagacatgccac 500
Query: 301 tggaccaacaaccttgagctctgaagctctacatatgttggcat 344
|||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 501 tggaccaacaaccttgagctctgaagctctgcatatgttggcat 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
