Query= MSMg01no467_a07.b1 MSMg01no467_a07.b1 CHROMAT_FILE:
MSMg01no467_a07.b1 PHD_FILE: MSMg01no467_a07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:42:45 2005
(344 letters)
>mm_chr18_44171090_44171833
Length = 744
Score = 623 bits (322), Expect = 0.0
Identities = 334/340 (98%), Gaps = 4/340 (1%)
Strand = Plus / Minus
Query: 5 atctgatcactgtattacatgtctcacaaacattagctggaattattttcttttccagat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 atctgatcactgtattacatgtctcacaaacattagctggaattattttcttttccagat 351
Query: 65 acgcacagtactgcacacacatgaagactagcactcatttttatcttactgccagctttg 124
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 atgcacagtactgcacacacatgaagactagcactcatttttatcttactgccagctttg 291
Query: 125 gggaattgatctcctgatcttgtttgtctgtaatttctgtctcttgggcttttcttagtt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gggaattgatctcctgatcttgtttgtctgtaatttctgtctcttgggcttttcttagtt 231
Query: 185 ataaaattatacaattcataagagtttgtgtgtgtgtgcatgtgtgtgtgtgtgtgtgtg 244
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 230 ataaaattatacaattcataagagtttgtgtgtgtgtgca----tgtgtgtgtgtgtgtg 175
Query: 245 tgtgtgtgtgtgtgtgaactgcttaaacataagttttcaaatcttatttttatttgcata 304
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 174 tgtgtgtgtgtgtgtgaactgcttagacataagttttcaaatcttatttttatttgcata 115
Query: 305 cataaagaaatctatttttctcttttgacatgactaaaag 344
||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 cataaagaaatctatttttctcttttgacatgactaaaag 75
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no467_a07.g1 MSMg01no467_a07.g1 CHROMAT_FILE:
MSMg01no467_a07.g1 PHD_FILE: MSMg01no467_a07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:42:45 2005
(245 letters)
>mm_chr18_43970864_43971508
Length = 645
Score = 451 bits (233), Expect = e-131
Identities = 242/245 (98%)
Strand = Plus / Plus
Query: 1 ttcattgttcaatagctttttccagcagtgtgagagaggctgaagaaaattcaaagaggg 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 ttcattgttcaatagctttttccagccgtgtgagagaggctgaagaaaattcaaagaggg 260
Query: 61 agtcaactgtactaaggtgtgaatggtagaccagaggtagaccaagatttacaggaaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtcaactgtactaaggtgtgaatggtagaccagaggtagaccaagatttacaggaaagt 320
Query: 121 ggatgacagttccaaggatctcaggatattgtcataggtggtatgtagactggagaatat 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggatgacagttgcaaggatctcaggatattgtcataggtggtatgtagactggagaatat 380
Query: 181 tccgggttccacttgttcaaaattctgtaggctaattcatatacctgggatttatgctta 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 tccgggttccacttgttcaaaattctgtaggctaattcatataactgggatttatgctta 440
Query: 241 ggaaa 245
|||||
Sbjct: 441 ggaaa 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
