Query= MSMg01no467_d17.b1 MSMg01no467_d17.b1 CHROMAT_FILE:
MSMg01no467_d17.b1 PHD_FILE: MSMg01no467_d17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:02 2005
(603 letters)
>mm_chr18_62543676_62544678
Length = 1003
Score = 1104 bits (571), Expect = 0.0
Identities = 592/599 (98%)
Strand = Plus / Plus
Query: 5 gaattctagagtatttcctttatacaaatgctgggcaatgcatgttagcctcatggagaa 64
||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctagagtatttcatttacacaaatgctgggcaatgcatgttagcctcatggagaa 264
Query: 65 tgttggatgtattttctgtatgagtggttctctgtcatactgcagtatatcgccccataa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgttggatgtattttctgtatgagtggttctctgtcatactgcagtatatcgccccataa 324
Query: 125 aggcctgctgtgttctctaactatagccatgatcaaatgtctacattagtcatcataaac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aggcctgctgtgttctctaactatagccatgatcaaatgtctacattagtcatcataaac 384
Query: 185 agcccctgcaggttatactacatccactaaaaatactgatttacacataagtaaaatctt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agcccctgcaggttatactacatccactaaaaatactgatttacacataagtaaaatctt 444
Query: 245 tgacatggccaaggtcagatctcaaaactttattgatcaactgactcacacactacactg 304
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 445 tgacatggccaaggtcagatctcaaaacgcaattgatcaactgactcacacactacactg 504
Query: 305 ttgtttactctgatactcaagacaaggacatacgatcaagccctccccactgacagtgtt 364
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 505 ttgtttactctgatactcaagacaaggacatacaatcaagccctccccactgacagtgtt 564
Query: 365 cttaattcagtctgtagcttcccactgaactgctaaggcacagctcctgggtctctcaaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cttaattcagtctgtagcttcccactgaactgctaaggcacagctcctgggtctctcaaa 624
Query: 425 tttgccattctgatttcatttgggcatggtgcaaccctttcctctgcatcccatcccagc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tttgccattctgatttcatttgggcatggtgcaaccctttcctctgcatcccatcccagc 684
Query: 485 catgggcttctcttttctgctggaccaaggctctcagtgctgcactagcagcctcgttcc 544
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 catggacttctcttttctgctggaccaaggctctcagtgctgcactagcagcctcgttcc 744
Query: 545 tgccttcagcctgctcttcagtaactcctgttctctttgcaatctcacctcaacgatga 603
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tgccttcagcctgctcttcagtaactcctgttctctttgcaatctcacctcaacgatga 803
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1003
Length adjustment: 10
Effective length of query: 593
Effective length of database: 993
Effective search space: 588849
Effective search space used: 588849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no467_d17.g1 MSMg01no467_d17.g1 CHROMAT_FILE:
MSMg01no467_d17.g1 PHD_FILE: MSMg01no467_d17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:02 2005
(566 letters)
>mm_chr18_62655284_62656248
Length = 965
Score = 1087 bits (562), Expect = 0.0
Identities = 565/566 (99%), Gaps = 1/566 (0%)
Strand = Plus / Minus
Query: 1 accaggcatctttcaaagtcatctctactctccgcccccctatcttgcatgtatttgagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 accaggcatctttcaaagtcatctctactctccgcccccctatcttgcatgtatttgagg 706
Query: 61 agatacagagatgagaatggagtggaatggaattttacagagagggaaagaccaaagaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 agatacagagatgagaatggagtggaatggaattttacagagagggaaagaccaaagaac 646
Query: 121 ttacctaggttgtgtaggttaaaggtaggaaaatggagacctatgggaaacaggcctgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 ttacctaggttgtgtaggttaaaggtaggaaaatggagacctatgggaaacaggcctgtg 586
Query: 181 atgtgagagagtggatgacagagctaagacaaggacccggattttattttccaagatggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 atgtgagagagtggatgacagagctaagacaaggacccggattttattttccaagatggt 526
Query: 241 tcctgttccactagtcagaatagacctgtgaacaactgcaaactgaccctgagtaaaccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 tcctgttccactagtcagaatagacctgtgaacaactgcaaactgaccctgagtaaaccc 466
Query: 301 ttccaggagttttccaatgcctatgttaaaatgtttatctactgtggattctaaaattca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ttccaggagttttccaatgcctatgttaaaatgtttatctactgtggattctaaaattca 406
Query: 361 gactacaccctgcaacctggattgaaggggaaaatttatacatctggcatactgagtgac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 gactacaccctgcaacctggattgaaggggaaaatttatacatctggcatactgagtgac 346
Query: 421 tgtcctccaagcaactgccatcttagagcctttatctgtgccccctgtgggaaaaaaaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 345 tgtcctccaagcaactgccatcttagagcctttatctgtgccccctgtggg-aaaaaaaa 287
Query: 481 tcccatctgggattactgacaatttatacccttcccttcctgagtatccagctgcctctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 tcccatctgggattactgacaatttatacccttcccttcctgagtatccagctgcctctg 227
Query: 541 taccaactgataactgtgcatggctg 566
||||||||||||||||||||||||||
Sbjct: 226 taccaactgataactgtgcatggctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 965
Length adjustment: 10
Effective length of query: 556
Effective length of database: 955
Effective search space: 530980
Effective search space used: 530980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
