TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGCGCGGA
ATTCAACAAAGTGACCTCTCTACTGAAAAAAAAATCAAATTGAAGTTTGG
AAATAAAAATCTCAGTTAATCAAGTAAACTCAGCCGAGGACTCACCACCA
TGATGGATCAGGTGGAGGTTAGAAGGTCAGGGAAGGGAGAGGAAAGGAGA
TAAATTAGGATAGTCAACACTGACCAAAAGTAAGATAAAAGAAAGTATGG
CCGTATGAAATCTATAATATAGCATTAAAAGACTGAGTCTATAAATCATT
GGGATAGAAGGAGGAGAGGAATTTAAGGCCAAACACAGAAACAGTCAGTG
AAATTATAGCAGAAGTCCCAAATTTAGCAAGATTATAGTCCAGACTCATG
ATGCTTTTTGATCATCAGACAAGGCTAGAAAGAAACCTCCCTAGATCATA
TTATAACACTAAAAACATTACACTCTAAACCTAGAGGAAAAAAAGAGATT
GAAAGCTATGAGAGAGAAGCACTCAGTCACAGAGAGACAAAGCCTTCCCA
ACCAACAGCACGTTTCTCAACAGAAACCCTAAAACCTAGGAGTGTATGGT
GCAATGTATCCCAAGCATAAAAATACAATGATTGCTTGCCTATATTACTA
CATCCAGCAACATGGTCTGTCATTCCTGAAGAAAGGAGAACTTTCCACAA
CAGAAAAAAACTAAAGGAATTCATGATCAGTATACTACAGAAGATATTGG
ATGGGAACCCTTAAGA

ATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCTGTTTGTAAAGTATGTGCATGTGTAC
ATATCTCTGTGCAGGTATGCACAAGTACCCAAAGCGGCCATCTTGCCTGG
AGCTGGAGCTACAGGCAGTTGTGAGCCACCATCACCAGTGTTGGGAACCA
AACAGAGATCCTCTGCAAGATCATGGAGCACCACTGAGCCATTTCTTCAG
CATCTATCTAAGCATGTCTTAATTCAACTAAATGGATAATCGATTCATTA
TCACATCATGTATGTCTTAGTCACCTTTCTCTTAGAACTTAGGACAAACA
ACCTCCCCATCCCCCCAAAACAAAAAGCAAAAACAAAAAACAAAAAACAA
AAACAAAAACAAAACCTTATCACACCTTTACTCGACAGTATGTTCTCTCT
GAGATGAAAATGTCCTGTTTTCTAGAAGTGACACCTTGATTTCCCTTTGC
TCCTTGGTGAGCAAAGGCATGTGTTCTAATATTAAATTTTCTCACCTGCT
AGAGTCCTGTGACAATTTCCACTTAGTTTTATCACACTCGGTGGATCTGC
CCTGGGAAGATCAGAGGCATGTTAGTTCCCTACTGTATGCACATCTTCAT
GTGTGTGGTGTGTGCTGTGTGGGCGCACATGCATGTGTGTGGAGATCAAA
GGTGAGGGTTGGGTGTCTTCCTTGATTGCTTGCCACCTTGCTTGTTCTTA
CATGTTCTACTGAATGG

Query= MSMg01no471_f19.g1 MSMg01no471_f19.g1 CHROMAT_FILE:
MSMg01no471_f19.g1 PHD_FILE: MSMg01no471_f19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:35 2005
         (626 letters)



>mm_chr18_54194588_54195613
          Length = 1026

 Score = 1100 bits (569), Expect = 0.0
 Identities = 608/625 (97%), Gaps = 8/625 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctgtttgtaaagtatgtgcatgtgtacatatctctgtgcaggtatgcacaagtacccaaa 60
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 ctgtttgtaaagtacgtgcatgtgtacatatctctgtgcaggtatgcacaagtacccaaa 610

                                                                       
Query: 61  gcggccatcttgcctggagctggagctacaggcagttgtgagccaccatcaccagtgttg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 gcggccatcttgcctggagctggagctacaggcagttgtgagccaccatcaccagtgttg 550

                                                                       
Query: 121 ggaaccaaacagagatcctctgcaagatcatggagcaccactgagccatttcttcagcat 180
           ||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 549 ggaaccaaac--agatcctctgcaagatcatcgagcaccactgagccatttcttcagcat 492

                                                                       
Query: 181 ctatctaagcatgtcttaattcaactaaatggataatcgattcattatcacatcatgtat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ctatctaagcatgtcttaattcaactaaatggataatcgattcattatcacatcatgtat 432

                                                                       
Query: 241 gtcttagtcacctttctcttagaacttaggacaaacaacctccccatccccccaaaacaa 300
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 431 gtcttagtcacctttctcttagaacttaggacaaacatcctccccatccccccaaaacaa 372

                                                                       
Query: 301 aaagcaaaaacaaaaaacaaaaaacaaaaacaaaaacaaaaccttatcacacctttactc 360
           |||||||||||||||||||      |||||||||||||||||||||||||||||||||||
Sbjct: 371 aaagcaaaaacaaaaaaca------aaaaacaaaaacaaaaccttatcacacctttactc 318

                                                                       
Query: 361 gacagtatgttctctctgagatgaaaatgtcctgttttctagaagtgacaccttgatttc 420
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gacagtatgttctctctgagacgaaaatgtcctgttttctagaagtgacaccttgatttc 258

                                                                       
Query: 421 cctttgctccttggtgagcaaaggcatgtgttctaatattaaattttctcacctgctaga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 cctttgctccttggtgagcaaaggcatgtgttctaatattaaattttctcacctgctaga 198

                                                                       
Query: 481 gtcctgtgacaatttccacttagttttatcacactcggtggatctgccctgggaagatca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 197 gtcctgtgacaatttccacttagttttatcacactcggtggatctgccctgggaagatcg 138

                                                                       
Query: 541 gaggcatgttagttccctactgtatgcacatcttcatgtgtgtggtgtgtgctgtgtggg 600
           ||||||||||||| ||||||||| || | |||||||||||||||||||||||||||||||
Sbjct: 137 gaggcatgttagtcccctactgtgtgtatatcttcatgtgtgtggtgtgtgctgtgtggg 78

                                    
Query: 601 cgcacatgcatgtgtgtggagatca 625
           |||||||||||||||||||||||||
Sbjct: 77  cgcacatgcatgtgtgtggagatca 53


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space:   625856
Effective search space used:   625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)