Query= MSMg01no472_e05.b1 MSMg01no472_e05.b1 CHROMAT_FILE:
MSMg01no472_e05.b1 PHD_FILE: MSMg01no472_e05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:50 2005
(516 letters)
>mm_chr18_84724417_84725329
Length = 913
Score = 888 bits (459), Expect = 0.0
Identities = 498/513 (97%), Gaps = 5/513 (0%)
Strand = Plus / Plus
Query: 5 gaattctcactgctacgtgcacacacacatgtggcgttcaaactcagaaggaaggacagg 64
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 205 gaattctcactgctacgtgcacacacacatgtggcgttcaaactcagaagga----cagg 260
Query: 65 agcctgcaggtcttagagggagaagtaacgcagatgcctgtctttcctgcagaccatgca 124
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 agcctgcaggtcttagagggagaagtaatgcagatgcctgtctttcctgcagaccatgca 320
Query: 125 gggcatgcaatgctcactgactgtagtgtagaccccagttctccctaagcattttgaaca 184
| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagcatgcaatgctcactgactctagtgtagaccccagttctccctaagcattttgaaca 380
Query: 185 tctccctcactcgttctttcactcagtcattcacgcccatccaacagttacactgcacac 244
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 tctccctcactcgttctttcactcagtcattcacacccatccaacagttacactgcacac 440
Query: 245 caactttaagtgaagtgtgtgcagagtagtagtgaatggagtcagcccctttccaccagg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 441 caactttaagtgaagtgtgtgcagagtagtagtgaatggagtcagcccctttccaccggg 500
Query: 305 ctcagtctgcaagctaacgtggtgaactacgtagtttctaaaccattacatactgagtac 364
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 501 ctcagtctgcaagctaacgtggtgaactacatagtttctaaaccattacatactgagtaa 560
Query: 365 cagacacccagcactaagagttttcggtgaatttgcacacaccaccataggtacccacat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagacacccagcactaagagttttcggtgaatttgcacacaccaccataggtacccacat 620
Query: 425 acaaactttttccaaagggcataagggaccaaattactatgaacacaaa-cagagtggct 483
|||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||
Sbjct: 621 acaaactttttccaaagggcataagggaccaaattactataaacacaaaacagaatggct 680
Query: 484 tcctgatatcttgaggcttaagtgtattttcca 516
|||||||||||||||||||||||||| ||||||
Sbjct: 681 tcctgatatcttgaggcttaagtgtactttcca 713
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 913
Length adjustment: 10
Effective length of query: 506
Effective length of database: 903
Effective search space: 456918
Effective search space used: 456918
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no472_e05.g1 MSMg01no472_e05.g1 CHROMAT_FILE:
MSMg01no472_e05.g1 PHD_FILE: MSMg01no472_e05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:50 2005
(427 letters)
>mm_chr18_84899520_84900346
Length = 827
Score = 803 bits (415), Expect = 0.0
Identities = 424/427 (99%)
Strand = Plus / Minus
Query: 1 acttcctcctacacagaccagaatctcttctcttaccacaaacatggcagcctgcttcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 acttcctcctacacagaccagaatctcttctcttaccacaaacatggcagcctgcttcca 568
Query: 61 ctcaccgtaaagtccctcttgatggcgaagttctcaggtttgacatcacagaggtggagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ctcaccgtaaagtccctcttgatggcgaagttctcaggtttgacatcacagaggtggagc 508
Query: 121 cggtgggaaaagtcactgtcgaaatggctcaccatgtccaggaagctgagggcaatgtgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 cggtgggaaaagtcactgtcgaaatggctcaccatgtccaggaagctgagggcaatgtgg 448
Query: 181 ctaatagcctgtgcttggccagcatcatccagtgggaagagagccttgtggtgagggcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ctaatagcctgtgcttggccagcatcatccagtgggaagagagccttgtggtgagggcta 388
Query: 241 ccagtattcaagtactccactgcataaaagtgaccgcaggatcccagcaccggtaggatg 300
|||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ccagcagccaagtactccactgcataaaagtgaccgcaggatcccagcaccggtaggatg 328
Query: 301 tggcggctcagatctggaagcaggctgaagtatacgtattcctcctgttggagcagtgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tggcggctcagatctggaagcaggctgaagtatacgtattcctcctgttggagcagtgac 268
Query: 361 cacgcactggccagctgttgccgccagccagggccctgcctggcaggccatagcggggct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 cacgcactggccagctgttgccgccagccagggccctgcctggcaggccatagcggggct 208
Query: 421 atgctgt 427
|||||||
Sbjct: 207 atgctgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space: 341924
Effective search space used: 341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
