Query= MSMg01no472_e06.b1 MSMg01no472_e06.b1 CHROMAT_FILE:
MSMg01no472_e06.b1 PHD_FILE: MSMg01no472_e06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:50 2005
(595 letters)
>mm_chr18_16768790_16769784
Length = 995
Score = 1112 bits (575), Expect = 0.0
Identities = 587/591 (99%)
Strand = Plus / Plus
Query: 5 gaattcagttttgctcttaaaataactaacatgtgctagcatttgcaggtgggtgtgcat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagttttgctcttaaaataactaacatgtgctagcatttgcaggtgggtgtgcat 264
Query: 65 ggatggatgacttggaggctcattaagagagtgaactttgccagcaataaagatgcagaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggatggatgacttggaggctcattaagagagtgaactttgccagcaataaagatgcagaa 324
Query: 125 agtggtcttcacagtcgtgtccagactctgccatctgctagtttgcttatgaagcagaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agtggtcttcacagtcgtgtccagactctgccatctgctagtttgcttatgaagcagaaa 384
Query: 185 gattttgtaaaagaatggtttcaagggatcaaatacagaatggttaaataatactctagt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gattttgtaaaagaatggtttcaagggatcaaatacagaatggttaaataatactctagt 444
Query: 245 tcagtcagatggttgggcctggttgcccacagagaccccctggcacaagcagatagaggg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcagtcagatggttgggcctggttgcccacagagaccccctggcacaagcagatagaggg 504
Query: 305 cctggatgggcttcaagggttttcttgtatctgtgccccattcttctgtctaggcaacat 364
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 505 cctggatgggcttcaagggttttcttgtatctgtgcctcattcttctgtctaggcaacat 564
Query: 365 gcctagatgccagattttaattcttgtccaaattgtatatttagactttgtgttttttag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gcctagatgccagattttaattcttgtccaaattgtatatttagactttgtgttttttag 624
Query: 425 taatttggctggatggattgagtccctggtttttacctttgtatatatgctcaattttgc 484
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 625 taatttggctggatggattgagtccctggtttttacctttgtatatgtgctcaattttgc 684
Query: 485 aaatcatacttaaccatttaattggatcttactcttggcctgctctagagagtaactacc 544
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 685 aaatcatacttaaccatttaattggatcttattcttggcctgctctagagagtaactacc 744
Query: 545 agtatttctggagtatattacagctaagtcgagagccttgctgatcataga 595
||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 745 agtatttctggagtatattacagctaagtcgcgagccttgctgatcataga 795
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 995
Length adjustment: 10
Effective length of query: 585
Effective length of database: 985
Effective search space: 576225
Effective search space used: 576225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no472_e06.g1 MSMg01no472_e06.g1 CHROMAT_FILE:
MSMg01no472_e06.g1 PHD_FILE: MSMg01no472_e06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:50 2005
(508 letters)
>mm_chr18_16925232_16926137
Length = 906
Score = 932 bits (482), Expect = 0.0
Identities = 501/508 (98%), Gaps = 2/508 (0%)
Strand = Plus / Minus
Query: 1 ttggaagctctggataagccatctgcagctcattccttcttctggtgaatggtatgcatg 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 706 ttggaagctctggataagccatctgcagctcattccttcttcaggtgaatggtatgcatg 647
Query: 61 ctatgaaccaattcacacatatggtggaatatgtggttatatatgcacacacactgtagt 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 646 ctatgaaccaattcacacatatggtggaatatgtggttatatacgcacacacactgtagt 587
Query: 121 gtattcatcctttctgttatgatctatctgttgatagacacttgaagcattctcactgat 180
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 586 gtattcatcctttctgttatgatctatctgttgatagacac--gaagcattctcactgat 529
Query: 181 ggctcactgagaatcctgctggtgtgtatattatacagtcaagtagaggagagacattgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 ggctcactgagaatcctgctggtgtgtatattatacagtcaagtagaggagagacattgc 469
Query: 241 aaaaattttacattttccatggggagaagggggcactgagtagacattagaggggaaagt 300
||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 468 aaaaagtttacattttccatggggagaaggaggcactgagtagacattagaggggaaagt 409
Query: 301 ggctacacatgggggatcatttttaaatagatactaaatgtttttatggtaaggaaatga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 ggctacacatgggggatcatttttaaatagatactaaatgtttttatggtaaggaaatga 349
Query: 361 gtccagtggaaggaaaatgccacagtctagtagacgggagtcagtggcttgagaaatgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gtccagtggaaggaaaatgccacagtctagtagacgggagtcagtggcttgagaaatgaa 289
Query: 421 atgaggtggaactccgggacctggactgctcgccagcactgcctgtgagttacacacctg 480
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 288 atgaggtggaactccgggacctggactgctcgccagcgctgcctgtgagttacacacctg 229
Query: 481 cattcggacccctccaaggcgttggcta 508
||||||||||||||||||||||||||||
Sbjct: 228 cattcggacccctccaaggcgttggcta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 906
Length adjustment: 10
Effective length of query: 498
Effective length of database: 896
Effective search space: 446208
Effective search space used: 446208
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
