Query= MSMg01no472_k10.b1 MSMg01no472_k10.b1 CHROMAT_FILE:
MSMg01no472_k10.b1 PHD_FILE: MSMg01no472_k10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:21 2005
(490 letters)
>mm_chr18_28343857_28344745
Length = 889
Score = 878 bits (454), Expect = 0.0
Identities = 478/486 (98%), Gaps = 1/486 (0%)
Strand = Plus / Minus
Query: 5 gaattcttctcttacgggcggtcaaaataatacttcatattgaaaatatattttcaggat 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gaattcttctcttaagggcggtcaaaataatacttcatattgaaaatatattttcaggat 428
Query: 65 atgagttgacacaattagcaaccactaattggtaagtggcttgaagcttacacagcaaga 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 427 atgagttgacacaattagcaaccactaattggtaagtggcttgaagcttacacagcaaca 368
Query: 125 gttaggtgaataatgacattttattaggtaattgttgaggtaaataggcaacataatgtt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gttaggtgaataatgacattttattaggtaattgttgaggtaaataggcaacataatgtt 308
Query: 185 atctgtagttagggggatcagaaacctaaaaacatttctgtcaatgcctgagatccagta 244
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 307 atctgtagttagggggatcagaaacctaaaaacatttctgtcaatgcctgaggtccagta 248
Query: 245 gcgtaaattctagcccaggtgtgtatctatttttttttaattaagctgaaataaaaataa 304
||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||
Sbjct: 247 gcgtaaattctagcccaggtgtgtagctatttttttt-aattaaactgaaataaaaataa 189
Query: 305 tttttaaaaatgtaaatttgtttttaaaattagttttccttatttattggatatttttat 364
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 tttttaaaaatgtgaatttgtttttaaaattagttttccttatttattggatatttttat 129
Query: 365 ttatattacagaaaatcaaaattaattttcctagttaattttgtaatatttatctgacta 424
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 128 ttatattacagaaaatcaaaattaattttcctagttaattttgtgatatttatctgacta 69
Query: 425 ctctgtcaaaagaattatgtaaaatcaaaagttgaagtaatgtttttggctcccatttat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 ctctgtcaaaagaattatgtaaaatcaaaagttgaagtaatgtttttggctcccatttat 9
Query: 485 gctgtt 490
||||||
Sbjct: 8 gctgtt 3
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 889
Length adjustment: 10
Effective length of query: 480
Effective length of database: 879
Effective search space: 421920
Effective search space used: 421920
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no472_k10.g1 MSMg01no472_k10.g1 CHROMAT_FILE:
MSMg01no472_k10.g1 PHD_FILE: MSMg01no472_k10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:21 2005
(240 letters)
>mm_chr18_28214298_28214937
Length = 640
Score = 456 bits (236), Expect = e-133
Identities = 239/240 (99%)
Strand = Plus / Plus
Query: 1 taaaattatgttcttcttcatcatcatcatcatccacaacaacatcatcaaagttcttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taaaattatgttcttcttcatcatcatcatcatccacaacaacatcatcaaagttcttat 260
Query: 61 atgtaaaagcccactacaggttttacatagtattaatgaatcctattagaattgctttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgtaaaagcccactacaggttttacatagtattaatgaatcctattagaattgctttgc 320
Query: 121 atatgattgttttaaagaggggatgcaatgtattaagtactgtagaatagcgaaagtgtt 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 atatgattgttttaaagaggggatgcaacgtattaagtactgtagaatagcgaaagtgtt 380
Query: 181 ggaatgggcagaaacagactgcacacagaggcattcagtcagaagcgtttgtttttaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaatgggcagaaacagactgcacacagaggcattcagtcagaagcgtttgtttttaggt 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
