Query= MSMg01no473_c05.b1 MSMg01no473_c05.b1 CHROMAT_FILE:
MSMg01no473_c05.b1 PHD_FILE: MSMg01no473_c05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:03 2005
(251 letters)
>mm_chr18_57193522_57194172
Length = 651
Score = 466 bits (241), Expect = e-136
Identities = 247/249 (99%)
Strand = Plus / Minus
Query: 1 cctggaactggaattgtagacagtgtttaccctccatgtaagtgtggagaactgaactta 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 563 cctggaactggaattgtagacagtgtttaccctccatgtaagtgtggggaactgaactta 504
Query: 61 ggtcctcaggaagaacagcaagtgctcttaaccactgagccatctctccagcccgatggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ggtcctcaggaagaacagcaagtgctcttaaccactgagccatctctccagcccgatggt 444
Query: 121 aaacaaatgaaagaagtcacttagatgcatgggaatacgtcactatgctgtgataggaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aaacaaatgaaagaagtcacttagatgcatgggaatacgtcactatgctgtgataggaaa 384
Query: 181 actatgtgaaacatgcgcagaaattttcataaagttttaaaaattgatgttaaatggctg 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 acaatgtgaaacatgcgcagaaattttcataaagttttaaaaattgatgttaaatggctg 324
Query: 241 gcttatgta 249
|||||||||
Sbjct: 323 gcttatgta 315
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no473_c05.g1 MSMg01no473_c05.g1 CHROMAT_FILE:
MSMg01no473_c05.g1 PHD_FILE: MSMg01no473_c05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:03 2005
(478 letters)
>mm_chr18_57019334_57020210
Length = 877
Score = 862 bits (446), Expect = 0.0
Identities = 470/478 (98%), Gaps = 1/478 (0%)
Strand = Plus / Plus
Query: 1 aaggccagactggttttacgtagcaagttacaggatagccagagctacatactgagactc 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggccagactggttttatgtagcaagttacaggatagccagagctacatactgagactc 260
Query: 61 tgttaagaacaaaacaaactcctgaaaggctgactttcacagaaaggtaattatcaaaaa 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 tgttaagaacaaaacaaactcctgaaaggctgactttcacagaaagataattatcaaaaa 320
Query: 121 taaaaatatgtaagccatgaaaattgccaagacagggatggccaaagactcacattcctt 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 321 taaaaatatgtaagccatgaaaattgccaagacaggaatggccaaagactcacattcctt 380
Query: 181 cttgcctacatgctagaaagtgacataaataaatgcagttatagaagccatttttagtca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttgcctacatgctagaaagtgacataaataaatgcagttatagaagccatttttagtca 440
Query: 241 tcattgtttaggaaaaattatgtttaaaacttttcttgagatattagcaacacgccctta 300
|||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||
Sbjct: 441 tcattgtttaggaaaaattatgtttaaaacctttcttgagatattagcaacatgccatta 500
Query: 301 atattaatgcttgaatgaatcttaggaaggttcataaccttataggggcagggtttacat 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 501 atattaatgcttgaatgaatcttaggaaggttcataaccctataggggcagggtttacat 560
Query: 361 aaatacaaggtgaagcttctaaagcagtaggcaaaacagccaatgagtaagagaaaaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaatacaaggtgaagcttctaaagcagtaggcaaaacagccaatgagtaagagaaaaaaa 620
Query: 421 actagagaaggaggggaagtcaaggtcacaggttttacctggcactttcttgcattgc 478
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 -ctagagaaggaggggaagtcaaggtcacaggttttacctggcactttcttgcattgc 677
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 877
Length adjustment: 10
Effective length of query: 468
Effective length of database: 867
Effective search space: 405756
Effective search space used: 405756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
