AAATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGAATCCGC
GGAATTCAAGCTTCCTTTTCAGTATTGAATCCTGAATCAGATCTTACATC
GAGAAAATGTCCTAGTTGATCAAGTATAGAATTAAGAGTTGATCCAAGTG
CATACAGATTATGAAATGTTCATGAAAACATTGTGGTTTCTGATGACTTT
TCTCCTGATAATCCTAAATTAGTGGCAGGGCTTAGATGCCAACCTTTGCC
TGTTTCTAGTGCTTATATATAATTTTCCTCCTGATATAACAGGTGGTTAA
CAAATAGGAGCCTACATGTTTGCAAGACTTTCTTAGTTTCCTTCTAGATA
ATTCTTTCAGAACCTGCATTTGAAGGCTGAAACCTGATGATCTCAGAGCA
CATTCAGATACAGCACTCTTCCTAACTTCAGTGTTTATATTTGTTGTTAG
TCTGCATAGTACAAGGAATATACCAGGCAGTAAAGGAGTGTTGTTTGATA
AAGAAATGGCTGATAATCTAACTTTGATCTCCTCCTAAATGATGCATGTT
TTCTGGTGATTTGATTATTTTTACTCTTTATTTATCATTTTTTGGTATAA
TTTTTCCCTTAAAAAACCCTTTCTTTAATGTATGTATAGCTTTCTTTATT
ATCTTATGGTATTACCTAGAAATACTGTTTTAACGTTGGCCGCAATTGCA
TTTATCACGGGTGTCCTGCAAATTTTGGTTTTACTGGTCTTTAGATCAAT
ACCCACCTTTGAAGCCCTTTCCCATC

NNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATG
GCAGAGAAGCACCTGAAAAAATGTTCAACATCTTTAATCATCAGGGAAAT
GCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTA
AGATGAAAAATTCAGGTAACAGTAGATGCGGGCGAGGATGTGGAGAAAGA
GGAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTG
GAAATCAGTCTGGCGGTTCCTCAGAAAATTGGATATAGTACTACCGGAGG
ATCCAGCAATACCACTCCTGGGCATATATCCAGAAGATGCCCCAACGGGT
AAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGC
CAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGA
AAATGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAAT
GAATTTATGAAATTCCCAGCCAAATGGATGGGCCTGGAGGGCATCATCCT
GAGTGAGGTAACACATTCCCCAAGGAACTCCCACCATATGTACTCCCTGA
AAAGTGGATATTAACCCCCAACCCAGGATACCCAAGAATAAAAAAAATTT
GGGTTATCCCCAGAAATTCTTAAAAAAAGGAAAAATGTATTGGGGGAATC
ATAGTCCCCTTCCTTAATAAAGGGG

Query= MSMg01no473_i22.b1 MSMg01no473_i22.b1 CHROMAT_FILE:
MSMg01no473_i22.b1 PHD_FILE: MSMg01no473_i22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:41 2005
         (509 letters)



>mm_chr18_23449897_23450805
          Length = 909

 Score =  864 bits (447), Expect = 0.0
 Identities = 492/507 (97%)
 Strand = Plus / Minus

                                                                       
Query: 3   ggaattcaagcttccttttcagtattgaatcctgaatcagatcttacatcgagaaaatgt 62
           |||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 709 ggaattcaagcttcctcttaagtattgaatcctgaatcagatcttacattgagaaaatgt 650

                                                                       
Query: 63  cctagttgatcaagtatagaattaagagttgatccaagtgcatacagattatgaaatgtt 122
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 649 cctagttgatcaagtatagaattaagagttgatccaagtgcatactgattatgaaatgtt 590

                                                                       
Query: 123 catgaaaacattgtggtttctgatgacttttctcctgataatcctaaattagtggcaggg 182
           ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||
Sbjct: 589 catgaaaacattgtggtttctgatgacttttctcctgataatcctaaacgagtggcaggg 530

                                                                       
Query: 183 cttagatgccaacctttgcctgtttctagtgcttatatataattttcctcctgatataac 242
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 attagatgccaacctttgcctgtttctagtgcttatatataattttcctcctgatataac 470

                                                                       
Query: 243 aggtggttaacaaataggagcctacatgtttgcaagactttcttagtttccttctagata 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 aggtggttaacaaataggagcctacatgtttgcaagactttcttagtttccttctagata 410

                                                                       
Query: 303 attctttcagaacctgcatttgaaggctgaaacctgatgatctcagagcacattcagata 362
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 409 attctttcagaacctgcatttgaaggctgaaacctgataatctcagagcacattcagata 350

                                                                       
Query: 363 cagcactcttcctaacttcagtgtttatatttgttgttagtctgcatagtacaaggaata 422
           || |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 349 caacactcttcctaacttcagtgttcatatttgttgttagtctgcatggtacaaggaata 290

                                                                       
Query: 423 taccaggcagtaaaggagtgttgtttgataaagaaatggctgataatctaactttgatct 482
           |||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||| |
Sbjct: 289 taccaggcagtaaaggcgtgttgttcgataaagaaatggctgataatctaattttgattt 230

                                      
Query: 483 cctcctaaatgatgcatgttttctggt 509
           |||||||||||||||||||||||||||
Sbjct: 229 cctcctaaatgatgcatgttttctggt 203


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 909
Length adjustment: 10
Effective length of query: 499
Effective length of database: 899
Effective search space:   448601
Effective search space used:   448601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)