Query= MSMg01no474_o21.b1 MSMg01no474_o21.b1 CHROMAT_FILE:
MSMg01no474_o21.b1 PHD_FILE: MSMg01no474_o21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:32 2005
(546 letters)
>mm_chr18_86675369_86676315
Length = 947
Score = 1019 bits (527), Expect = 0.0
Identities = 542/547 (99%), Gaps = 1/547 (0%)
Strand = Plus / Plus
Query: 1 taataagacaataaaggtaacagatggttggaggggccagagtatgtcttgccatcttat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 taataagacaataaaggtaacagatggttggaggggccagagtatgtcttgccaccttat 260
Query: 61 ttattttctacaatatgttaattccatggttgtggttaatgaggaaacatactgagggtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttattttctacaatatgttaattccatggttgtggttaatgaggaaacatactgagggtc 320
Query: 121 acatgacaaagtccatgctcagagatttacactaaatctttacgttgaacc-aaaaaaaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 acatgacaaagtccatgctcagagatttacactaaatctttacgttgaaccaaaaaaaaa 380
Query: 180 ttgtgattctttgaatgaaactactgcaaacagtgtatactattagcttttgtgcagtca 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgtgattctttgaatgaaactactgcaaacagtgtatactattagcttttgtgcagtca 440
Query: 240 agaaaagtgaacttgtttataacttttataagattctgtaagtggtgagttcatttctta 299
||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 441 agaaaagtgaactggtttataacttttataagactctgtaagtggtgagttcatttctta 500
Query: 300 taccgagctgactactacagtgttttccaccaatgtgcaaatataactctgttaattagt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taccgagctgactactacagtgttttccaccaatgtgcaaatataactctgttaattagt 560
Query: 360 gtacttacttcatcaagagaagttgaaacatatccatattgccccataattttgtgttta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtacttacttcatcaagagaagttgaaacatatccatattgccccataattttgtgttta 620
Query: 420 ttcatctgtaaaatgtgtatcataaaagcttcttttcacatgaaactgtcaaggccaaat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttcatctgtaaaatgtgtatcataaaagcttcttttcacatgaaactgtcaaggccaaat 680
Query: 480 gatcatgcactggaagatattttttatattctatgatgcattgtaaaaataaatcatttt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gatcatgcactggaagatattttttatattctatgatgcattgtaaaaataaatcatttt 740
Query: 540 ctcaagt 546
|||||||
Sbjct: 741 ctcaagt 747
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 947
Length adjustment: 10
Effective length of query: 536
Effective length of database: 937
Effective search space: 502232
Effective search space used: 502232
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no474_o21.g1 MSMg01no474_o21.g1 CHROMAT_FILE:
MSMg01no474_o21.g1 PHD_FILE: MSMg01no474_o21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:33 2005
(452 letters)
>mm_chr18_86849845_86850696
Length = 852
Score = 843 bits (436), Expect = 0.0
Identities = 448/452 (99%)
Strand = Plus / Minus
Query: 1 atggccatcctcagctcctgaaacaagaaggcagcattaaatttgagagactttgttact 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 652 atggccatcctcagctcctgaaacaagaagacagcattaaatttgagagactttgttact 593
Query: 61 attccgctaatttgtaatatctattgattatctagtggttatatactgaaaatatgaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 attccgctaatttgtaatatctattgattatctagtggttatatactgaaaatatgaaaa 533
Query: 121 cataatgggccaataactttcaactattcaaagatgtctggttcagttctaagttcacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 cataatgggccaataactttcaactattcaaagatgtctggttcagttctaagttcacca 473
Query: 181 gaagacgtgagatgcccacaatggaacgtatctttcaagtctctcatttggcaatgtaga 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gaagacgtgagatacccacaatggaacgtatctttcaagtctctcatttggcaatgtaga 413
Query: 241 cagtctctcttgaactttatccaagaattagtcgataagaattgaacattgcatccttga 300
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 412 cagtctctcttgaacttcatgcaagaattagtcgataagaattgaacattgcatccttga 353
Query: 301 actcgactgggtttatcagtgcactacgtactggccaggccctttatacactctatggtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 actcgactgggtttatcagtgcactacgtactggccaggccctttatacactctatggtt 293
Query: 361 aaccaatttaaatacttcaaatattagtatgaagaatacttgtaacaaaattatgaatgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 aaccaatttaaatacttcaaatattagtatgaagaatacttgtaacaaaattatgaatgc 233
Query: 421 cattgcttgagtttatcctattgattgacttg 452
||||||||||||||||||||||||||||||||
Sbjct: 232 cattgcttgagtttatcctattgattgacttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space: 372164
Effective search space used: 372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
