Query= MSMg01no476_n08.b1 MSMg01no476_n08.b1 CHROMAT_FILE:
MSMg01no476_n08.b1 PHD_FILE: MSMg01no476_n08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:04 2005
(481 letters)
>mm_chr18_48723705_48724585
Length = 881
Score = 872 bits (451), Expect = 0.0
Identities = 471/478 (98%), Gaps = 2/478 (0%)
Strand = Plus / Plus
Query: 5 gaattctctatg-ttcactataaacagacagngcaaatgtaaatcctttggtcttatggt 63
|||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 205 gaattctctatgatt-actataaacagacagtgcaaatgtaaatcctttggtcttatggt 263
Query: 64 tttaagatcttactataaagccatattccataccatgtgccttatgaatggacctctcct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tttaagatcttactataaagccatattccataccatgtgccttatgaatggacctctcct 323
Query: 124 ttattgagcttggcaagtatggtcttcccattgccatctttgctgaatcagtacttctct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttattgagcttggcaagtatggtcttcccattgccatctttgctgaatcagtacttctct 383
Query: 184 ctgatgaagcattttctgttatgctctatagagaggaatgcctctatccatttgctttat 243
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctgatgaagcattttctgttctgctctatagagaggaatgcctctatccatttgctttat 443
Query: 244 ggagcaatctagttgcctggatggaagagttgtgtttcctagtgatgtgttttggtgcat 303
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 444 ggagcaatctagttgcctggatggaagagctgtgtttcctagtgatgtgttttggtgcat 503
Query: 304 tgtgggatgctgtatttctaagatggttgatttttgaattggttatcaggctcattttac 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgtgggatgctgtatttctaagatggttgatttttgaattggttatcaggctcattttac 563
Query: 364 atagtttctgcatacaatggtccattcaaacgtacaaatttatagatttcattttatggg 423
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 564 atagtttctgcatacaatggtccattcaaatgtacaaatttatagatttcattttatggg 623
Query: 424 tggagaataaagggctttcagttttaaaaactaacagttgacaaggtcctgctgcttc 481
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 624 tggagaataaagggctttcagttttaaaaactaacaattgacaaggtcctgctgcttc 681
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 881
Length adjustment: 10
Effective length of query: 471
Effective length of database: 871
Effective search space: 410241
Effective search space used: 410241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no476_n08.g1 MSMg01no476_n08.g1 CHROMAT_FILE:
MSMg01no476_n08.g1 PHD_FILE: MSMg01no476_n08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:04 2005
(243 letters)
>mm_chr18_48902392_48903034
Length = 643
Score = 470 bits (243), Expect = e-137
Identities = 243/243 (100%)
Strand = Plus / Minus
Query: 1 tgatgggctgttaaggtttggtatggagactatggaaatcaaaagccaaatcagacattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tgatgggctgttaaggtttggtatggagactatggaaatcaaaagccaaatcagacattg 384
Query: 61 ttttagtatgtggccttttaggctctcctcaaagtaaatcattggtatgggagtagagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ttttagtatgtggccttttaggctctcctcaaagtaaatcattggtatgggagtagagca 324
Query: 121 tgtgggagggaataggaagatgacaggcatgagactttacccgcacttcctgtcatctgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tgtgggagggaataggaagatgacaggcatgagactttacccgcacttcctgtcatctgg 264
Query: 181 actatagtgctcataaatgtaaggacaaaaggaagacttgtagattgaagcctgaaacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 actatagtgctcataaatgtaaggacaaaaggaagacttgtagattgaagcctgaaacaa 204
Query: 241 ctc 243
|||
Sbjct: 203 ctc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
