Query= MSMg01no477_d23.b1 MSMg01no477_d23.b1 CHROMAT_FILE:
MSMg01no477_d23.b1 PHD_FILE: MSMg01no477_d23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:38 2005
(654 letters)
>mm_chr18_65931711_65932764
Length = 1054
Score = 1232 bits (637), Expect = 0.0
Identities = 650/655 (99%), Gaps = 3/655 (0%)
Strand = Plus / Plus
Query: 2 gaattctccatcaaaaa--tacaacctagttaaccctgaaatgactgcagcaagaaagaa 59
||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaattctccatcaaaaagata-aacctagttaaccctgaaatgactgcagcaagaaagaa 259
Query: 60 cacaacaagtgcattctccaagggccatggttcacacacagaagttatagaacaacttta 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cacaacaagtgcattctccaagggccatggttcacacacagaagttatagaacaacttta 319
Query: 120 agtggcatttcttatcttaccccttgttggaagcagggtctcttgttcagtgcaatatac 179
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agtggcatttctgatcttaccccttgttggaagcagggtctcttgttcagtgcaatatac 379
Query: 180 atcagggcaagcaagctggctgtcgagattccggggtgttgggggaggattcccgtgtct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atcagggcaagcaagctggctgtcgagattccggggtgttgggggaggattcccgtgtct 439
Query: 240 gtttctcatctcaggataggcacactgggattacaaatgccagtgaccacatcaggtttt 299
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 440 gtttctcatctcaggataggcacactgggattacaaatgccagtgactacatcaggtttt 499
Query: 300 atgtggcttacagggacctgaattctggtcttcctacttacacaataagtgctttttcca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 atgtggcttacagggacctgaattctggtcttcctacttacacaataagtgctttttcca 559
Query: 360 ctgatccgtctcctcagcctctgggataagttattacagttataagtctctacagcatca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ctgatccgtctcctcagcctctgggataagttattacagttataagtctctacagcatca 619
Query: 420 cagcctgctcccaggtggtagtggaatgggctgtctgtgactgtagtgagaaagtgggtc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cagcctgctcccaggtggtagtggaatgggctgtctgtgactgtagtgagaaagtgggtc 679
Query: 480 attctcaggccatcttggcctccatgtcaggctcacccatttatagcttctgttgatgag 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 attctcaggccatcttggcctccatgtcaggctcacccatttatagcttctgttgatgag 739
Query: 540 tttgtgcttcatgttggtaaaactgatttccattttcgcctttcttaacttgcctacact 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tttgtgcttcatgttggtaaaactgatttccattttcgcctttcttaacttgcctacact 799
Query: 600 gtttattgaacttgataaggcaagctaaatggaaacttaaactagaaacgggtga 654
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 gtttattgaacttgataaggcaagctaaatggaaacttaaactagaaacgggtga 854
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space: 672336
Effective search space used: 672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no477_d23.g1 MSMg01no477_d23.g1 CHROMAT_FILE:
MSMg01no477_d23.g1 PHD_FILE: MSMg01no477_d23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:38 2005
(597 letters)
>mm_chr18_66147972_66148971
Length = 1000
Score = 1029 bits (532), Expect = 0.0
Identities = 582/600 (97%), Gaps = 3/600 (0%)
Strand = Plus / Minus
Query: 1 atctaaaaagagccagtattgctgatagaaagtcaagatgggaacccttctcacagagcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 atctaaaaagagccagtattgctgatagaaagtcaagatgggaacccttctcacagagcg 741
Query: 61 tcaatacgagtgggaaagtctgctgttaggggaggtttgagcaggaaaggattgcaggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tcaatacgagtgggaaagtctgctgttaggggaggtttgagcaggaaaggattgcaggag 681
Query: 121 agtcagatattgaggaggggtgtcattggacttggcctttgctctagtccgaagataggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 agtcagatattgaggaggggtgtcattggacttggcctttgctctagtccgaagataggg 621
Query: 181 agactaaaggctcttatctgtggcaagggtcacatctagaaagggcattatacagacagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 620 agactaaaggctcttatctgtggcaagggtcacatctagaaagggcattatgcagacagg 561
Query: 241 cttatagttgaaggatgttttcagggaaaggaaaggaccaagagagatgaaggaaaagga 300
|||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 560 cttacagttgaaggatattttcagggaaaggaaaggaccaagagagatggaggaaaagga 501
Query: 301 ggaaataaagtcagaaagatggtaaagactcagtgttttatctatcttggaaaattacaa 360
|| | |||||| |||||||||||||||||||||||||||||||| ||||| ||||||| |
Sbjct: 500 ggcagtaaagttagaaagatggtaaagactcagtgttttatctaccttgggaaattacca 441
Query: 361 ggcttggggcacttcatgt---cggtgataatcacacgatgacttgccaggcaagctttg 417
|||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ggcttgaggcacttcatgttgtcggtgataatcacacgatgacttgccaggcaagctttg 381
Query: 418 gaactacccctagctaaagccccttcgttattgtcaggtgcgttcgtcctttcccacaaa 477
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 380 gaactacccctagctaaagccccttcgttattgtcaggtgtgttcgtcctttcccacaaa 321
Query: 478 caagtctgtgacagttcctccgtggttggagctgcttcttgctatgcggtcactcatcca 537
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 320 caagtctgtgacagttcctccgtagttggagctgcttcttgctatgcggtcactcatcca 261
Query: 538 ctgggctcggtggctgctccgctttaaatctgaactgtggagtcacatgttctacagagt 597
||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 260 ctgggctcggtggctgctccgctttaaatctgaacagtggagtcatatgttctacagagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 1000
Length adjustment: 10
Effective length of query: 587
Effective length of database: 990
Effective search space: 581130
Effective search space used: 581130
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
