NTTACTCCTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTCACCTGTACGATACCGAATGGCAGAGAAGCACTTGAAAA
AATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTG
AGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGA
CAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTT
GGTGGGAGTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTC
CTCAGAAAACTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCT
GGGCATATATCCAGAAGATGCCCCAACAGGTAAGAAGGACACATGCTCCA
CTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCT
ACATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACAC
AATGGAGTACTACTCCAGCCNNNNNTTTTNNAAAAAAAAAAAAAAAAATA
TTTCTTNNNNTTTTATTTTCCCCCCAAAGGGGGGGGGGGGGGGGGGGGGT
CTTCTCTCTGGGGGGGGGGGTTTTTTTCATAAAAAAACACCCAAAATTTT
TTTTTTTCTTTTGGGGGGTGGGAGGGGCNCCCCCCCCCTGGCCGCGGGAA
AAAAAAGAAAAAATTTTTTTTTTTCTCCCCCCG

NNNCCCCTATGATAGTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATGGTTAACGCACAGCTTG
GAGGCCTCATTTATGAAAATTCCTTTAAACCTTTCGCCACTTTGACAAAT
CCTGTCCAAGTTCACTGAGCCAATTCAAAAGTAGCTCTCAGCCTTTTTAT
AGGTTTTCAATTACACCAGCACGGCAACCCAGAGCCACAGTGTTTGGAGA
ACTGTGTGTGAGTTGCAGAGAAACATGAATTCTTTTTTTAGGAGACTCAG
ATGAAAGGCCCCAAATTAGAGCCTATGGATGAAAACTTTGTCTATCTTGA
ACTGCCCATGTCTTACTGACGTGCCTGTTGGATAACTTAAACATGGCTAG
TATGTAGTTATTTACCATATGGTCTATGTGATGATTTTTCTAACTTTTAG
GAATTTACTTTGCAAAAATAAATATTGACATATTACTTCATGCTCCAGTT
GCCCTGGGTAGAGTTTTCCTTATGAAACTGCTCAAAATGTTGTCTGAGTT
CATTAATCCTCCTGATCCACAGCACGGGACAGCGGGATTTACTTTTCCTG
GGTTGATCAGGCACAGTTGAAGCAGGTCAAGGGGCTCTCCAGGGCGAAAC
TGACAAATGTTGGTCAAACTGAGGTTAAGCTTAATGCTAATCGATTTCAG
CACTTTTTTCCCCCTCTACATTTATTTATTCCAATGCATTTGC

Query= MSMg01no477_j07.g1 MSMg01no477_j07.g1 CHROMAT_FILE:
MSMg01no477_j07.g1 PHD_FILE: MSMg01no477_j07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:03 2005
         (657 letters)



>mm_chr18_52936903_52937957
          Length = 1055

 Score = 1236 bits (639), Expect = 0.0
 Identities = 652/657 (99%), Gaps = 2/657 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tatggttaacgcacagcttggaggcctcatttatgaaaattcctttaaacctttcgccac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 tatggttaacgcacagcttggaggcctcatttatgaaaattcctttaaacctttcgccac 796

                                                                       
Query: 61  tttgacaaatcctgtccaagttcactgagccaattcaaaagtagctctcagcctttttat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 tttgacaaatcctgtccaagttcactgagccaattcaaaagtagctctcagcctttttat 736

                                                                       
Query: 121 aggttttcaattacaccagcacggcaacccagagccacagtgtttggagaactgtgtgtg 180
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 735 aggttttcaattacaccagcacggcaacccagagccacagtgtttgaagaactgtgtgtg 676

                                                                       
Query: 181 agttgcagagaaacatgaattctttttttaggagactcagatgaaaggccccaaattaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 agttgcagagaaacatgaattctttttttaggagactcagatgaaaggccccaaattaga 616

                                                                       
Query: 241 gcctatggatgaaaactttgtctatcttgaactgcccatgtcttactgacgtgcctgttg 300
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 gccaatggatgaaaactttgtctatcttgaactgcccatgtcttactgacgtgcctgttg 556

                                                                       
Query: 301 gataacttaaacatggctagtatgtagttatttaccatatggtctatgtgatgatttttc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gataacttaaacatggctagtatgtagttatttaccatatggtctatgtgatgatttttc 496

                                                                       
Query: 361 taacttttaggaatttactttgcaaaaataaatattgacatattacttcatgctccagtt 420
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 495 taacttttaggaatttactttgcaaaaataaatattggcatattacttcatgctccagtt 436

                                                                       
Query: 421 gccctgggtagagttttccttatgaaactgctcaaaatgttgtctgagttcattaatcct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gccctgggtagagttttccttatgaaactgctcaaaatgttgtctgagttcattaatcct 376

                                                                       
Query: 481 cctgatccacagcacgggacagcgggatttacttttcctgggttgatcaggcacagttga 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 cctgatccacagcacgggacagcgggatttacttttcctgggttgatcaggcacagttga 316

                                                                       
Query: 541 agcaggtcaaggggctctccagggcgaaactgacaaatgttggtcaaactgaggttaagc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 agcaggtcaaggggctctccagggcgaaactgacaaatgttggtcaaactgaggttaagc 256

                                                                    
Query: 601 ttaatgctaatcgatttcagcacttttttccccctctacatttatttattccaatgc 657
           ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||
Sbjct: 255 ttaatgctaatcgatttcagcacttttt--cccctctacatttatttattccaatgc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1055
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1045
Effective search space:   676115
Effective search space used:   676115
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)