XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCACA
GTTCCATTCTAACAAGCCTAAGTGAGTTGGATCTAGGGTGGACTACGTAA
TTTGGTTGGACACTTTCGGAGAACACAAACACTTCCTTCCTGAATTGGAT
TGTTAATTTTCTAAGCTTGCTTGAAGAGTGTTTGCTGTGTGTTTATTACA
TACTTTGTGCTTCAAGAAAAATTAAGCGAGCAAGCTTCATATCAGTGGCA
TTACCTGAAGGTCAGATGCTGTGCTACCTTCAAGAAGTGAGTGTGTACAC
ACCCATTCATTCTCACACATTAACATATGTTTTACCAGGGATCCAGGACA
AGGGTCTTAGACTATTAGAATTTACATAAAGCAAAAATGAAAGGAACTAA
AATGTGTGTTTAATGTTGAACCAAAATTGTTCAAGACAAATTAGAAAATT
CTCCAAATTCCTGTAAGGAAATATGTTCCCATATTTTACATCATCTTCCA
TGTTTCAATAGATATTTATGAGGTTTAGAAGTGTTTAATCTGTTGCTACT
GCACCACTACTCAGCATGATGTCTGGCCAGTGGTGGTCTAAGATGAGTAT
CCCTTGTCCCATTGTCTTTCTACACTGAGGCAGCTTGTTCGACACATCAC
TAAGTGACCCTTGTGTTGAGATCAAATCCAATAATAATTGCCTCANGAGT
TATAATTGGAAGCCAACTATAATTTTTTTTCA

GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXCTGATCTTTCCAAAACTTTAATCATGAATGGGTGTT
GGATCTTGTCAAATGCTTTTTCTGCATCTAACAAGATGATCATGTGGTTT
TTGTCTTTGAGTTTGTTTATATAATGGATTACATTGATGGATTTTCGTAT
ATTAAACCATCCCTGCATCCCTGGAATAAAACCTACTTGGTCAGGATGGA
TGATTGCTTTAATGTGTTCTTGGATTCGGTTAGCGAGAATTTTATTGAGG
ATTTTTGCATCGATATTCATAAGAGAAATTGGTCTGAAGTTCTCTATCTT
TGTTGAGTCTTTCTGTGGTTTAGGTATCAGAGTAATAGTTGCTTCATAAA
ATGAGTTGGGTAGAATACCTTCTACTTCTATCTTGTGAAAAAGTTTGTGC
AGAACTGGAATTAGATCGTCTTTGAAGGTCTGATAGAACTCTGCACTAAA
CCCGTCTGGTCCTGGGCTTTTTTTGGCTGGGAGACTATTAATAACTGCTT
CTATTTCTTTAGGGGATATGGGACTGTTTAGAAGGTCAACTTGATCCTGA
TTCAACTTTGGTACCTGGTATATGTCCAGAAATTTGTCCATTTCGTCCAG
GTTTTCTAGTTTTGTTGAGTATAGCCTTTTGTAGAAGGATCTGATGGTGT
TTTGGATTTCTTCAGGATCTGTTGTTATGTCTC

Query= MSMg01no478_b02.b1 MSMg01no478_b02.b1 CHROMAT_FILE:
MSMg01no478_b02.b1 PHD_FILE: MSMg01no478_b02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:41 2005
         (663 letters)



>mm_chr18_48808615_48809677
          Length = 1063

 Score = 1237 bits (640), Expect = 0.0
 Identities = 657/663 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   taacaagcctaagtgagttggatctagggtggactacgtaatttggttggacactttcgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taacaagcctaagtgagttggatctagggtggactacgtaatttggttggacactttcgg 260

                                                                       
Query: 61  agaacacaaacacttccttcctgaattggattgttaattttctaagcttgcttgaagagt 120
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 agaacacaaacacttccttcctgaattggattgttaattttctaagctggcttgaagagt 320

                                                                       
Query: 121 gtttgctgtgtgtttattacatactttgtgcttcaagaaaaattaagcgagcaagcttca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtttgctgtgtgtttattacatactttgtgcttcaagaaaaattaagcgagcaagcttca 380

                                                                       
Query: 181 tatcagtggcattacctgaaggtcagatgctgtgctaccttcaagaagtgagtgtgtaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatcagtggcattacctgaaggtcagatgctgtgctaccttcaagaagtgagtgtgtaca 440

                                                                       
Query: 241 cacccattcattctcacacattaacatatgttttaccagggatccaggacaagggtctta 300
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 441 cacccattcattctcacacattaacatatgttttaccagggatccagaacaagggtctta 500

                                                                       
Query: 301 gactattagaatttacataaagcaaaaatgaaaggaactaaaatgtgtgtttaatgttga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gactattagaatttacataaagcaaaaatgaaaggaactaaaatgtgtgtttaatgttga 560

                                                                       
Query: 361 accaaaattgttcaagacaaattagaaaattctccaaattcctgtaaggaaatatgttcc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 accaaaattgttcaagacaaattagaaaattctccaaattcctgtaaggaaatatgttcc 620

                                                                       
Query: 421 catattttacatcatcttccatgtttcaatagatatttatgaggtttagaagtgtttaat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 catattttacatcatcttccatgtttcaatagatatttatgaggtttagaagtgtttaat 680

                                                                       
Query: 481 ctgttgctactgcaccactactcagcatgatgtctggccagtggtggtctaagatgagta 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctgttgctactgcaccactactcagcatgatgtctggccagtggtggtctaagatgagta 740

                                                                       
Query: 541 tcccttgtcccattgtctttctacactgaggcagcttgttcgacacatcactaagtgacc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tcccttgtcccattgtctttctacactgaggcagcttgttcgacacatcactaagtgacc 800

                                                                       
Query: 601 cttgtgttgagatcaaatccaataataattgcctcangagttataattggaagccaacta 660
           |||||||||||||||||||||| ||||||||||||| ||||| | |||||||||||||||
Sbjct: 801 cttgtgttgagatcaaatccaacaataattgcctcaggagttctcattggaagccaacta 860

              
Query: 661 taa 663
           |||
Sbjct: 861 taa 863


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space:   687609
Effective search space used:   687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)