XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCT
CCTTTTCGACATGGTAGTTTAAGAGCCCTTACCTCAACTGAAGAGAGAGC
AACTATTCATATGTAGCTTATGGCTGCCATGGAAGAGTGCCTAGTATGTG
CAAAAAGATTCAGACATTTAAGATTTGTGTGAGCATGTTCTTAGCTTTAT
GACATTAGGAAAGAAAAAATATGAAACAAATCTTACTCGGGTGTTCATAG
GAAAACTCTAGTTTGCTGATTTCCTCTGGGAGAGTGACTTACTGAATACC
TAGCTAACAGTTTGTATTACCAGCTGACAGACAGACAGGCTCAATTCCTA
AGTGGACTGAACGGATTTCCTGGTGGAAAATGCTAACGAAGTGAGTGATA
GAGTCTATTCGCTTAGATGATGAAGATTAGATTAGAAAGTCCGTGCATGG
TGAATTAGCATTGATCCAAGTTGTTAGTAAATGTCCCGTAATCATGTTAT
GATAATAACTGATTTTATTGTATGAATGTCCACTTTCTGACACCCGATTT
AAATATTGCCTTGTACAGAATTATAAGAAAAATACAATTGTGTTACAGAT
GAAAAAGCTGAATTGCAGTGGAATTAAGATGTTCCCGAGGCCCAGTGCTA
TTAGGAGGGGGAGCTGGGACTCCACCTTTCTATATTCCCCAAGGCTGGCA
TTAAAACCTTCATGCCAAGCTATTTCTCTCAGAA

GAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTTTAGCTCTGAGAGATATGAGACTGTGCTGTGTC
CAGGCCTGCAGAGCAAGCAGAGGTCAGAAAGATCTGAGTACGAAATTGGG
GGAGTTTCCAAGCGTTTGAGAGAAAGGAACACTTCAACCCGACTATCATA
GGAATGATTGGTTTCTCTCCACCTAACCCTTGACCTATTAGTGGGCTGGA
AACTTTCATTGTCATATAGACAGGCAGACCAGGGTCTTTACTTTTATTTA
AGTACCAGTGTAGTAACACTGGCTTTGGAGACACAAAAGAAATGGCTCTG
GAAGAGAACCATTATGTTTCAGCATAAGTTAATCCTACCAAGGAGGGAGC
TTCATTATAGAATTTCCATGCATACATTTGGAAGATACTAGTGCAAATTC
TGAGAGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGNAN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNTNNTTTNTNNNTNTNTT
NTTTTNTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTNTNNTTTTTTT
TTTTGGGTTTTTG

Query= MSMg01no478_l02.b1 MSMg01no478_l02.b1 CHROMAT_FILE:
MSMg01no478_l02.b1 PHD_FILE: MSMg01no478_l02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:28 2005
         (391 letters)



>mm_chr18_52393287_52394077
          Length = 791

 Score =  756 bits (391), Expect = 0.0
 Identities = 391/391 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   taccagctgacagacagacaggctcaattcctaagtggactgaacggatttcctggtgga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taccagctgacagacagacaggctcaattcctaagtggactgaacggatttcctggtgga 260

                                                                       
Query: 61  aaatgctaacgaagtgagtgatagagtctattcgcttagatgatgaagattagattagaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaatgctaacgaagtgagtgatagagtctattcgcttagatgatgaagattagattagaa 320

                                                                       
Query: 121 agtccgtgcatggtgaattagcattgatccaagttgttagtaaatgtcccgtaatcatgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtccgtgcatggtgaattagcattgatccaagttgttagtaaatgtcccgtaatcatgt 380

                                                                       
Query: 181 tatgataataactgattttattgtatgaatgtccactttctgacacccgatttaaatatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatgataataactgattttattgtatgaatgtccactttctgacacccgatttaaatatt 440

                                                                       
Query: 241 gccttgtacagaattataagaaaaatacaattgtgttacagatgaaaaagctgaattgca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gccttgtacagaattataagaaaaatacaattgtgttacagatgaaaaagctgaattgca 500

                                                                       
Query: 301 gtggaattaagatgttcccgaggcccagtgctattaggagggggagctgggactccacct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtggaattaagatgttcccgaggcccagtgctattaggagggggagctgggactccacct 560

                                          
Query: 361 ttctatattccccaaggctggcattaaaacc 391
           |||||||||||||||||||||||||||||||
Sbjct: 561 ttctatattccccaaggctggcattaaaacc 591


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 391
Length of database: 791
Length adjustment: 9
Effective length of query: 382
Effective length of database: 782
Effective search space:   298724
Effective search space used:   298724
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no478_l02.g1 MSMg01no478_l02.g1 CHROMAT_FILE:
MSMg01no478_l02.g1 PHD_FILE: MSMg01no478_l02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:28 2005
         (432 letters)



>mm_chr18_52516847_52517678
          Length = 832

 Score =  803 bits (415), Expect = 0.0
 Identities = 427/431 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttagctctgagagatatgagactgtgctgtgtccaggcctgcagagcaagcagaggtca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tttagctctgagagatatgagactgtgctgtgtccaggcctgcagagcaagcagaggtca 526

                                                                       
Query: 61  gaaagatctgagtacgaaattgggggagtttccaagcgtttgagagaaaggaacacttca 120
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 gaaagaactgagtacgaaattgggggagtttccaagcgtttgagagaaaggaacacttca 466

                                                                       
Query: 121 acccgactatcataggaatgattggtttctctccacctaacccttgacctattagtgggc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 acccgactatcataggaatgattggtttctctccacctaacccttgacctattagtgggc 406

                                                                       
Query: 181 tggaaactttcattgtcatatagacaggcagaccagggtctttacttttatttaagtacc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 tggaaactttcattgtcatatagacaggcagaccagggtctttacttttatttaagtacc 346

                                                                       
Query: 241 agtgtagtaacactggctttggagacacaaaagaaatggctctggaagagaaccattatg 300
           || | || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 agcgaagcaacactggctttggagacacaaaagaaatggctctggaagagaaccattatg 286

                                                                       
Query: 301 tttcagcataagttaatcctaccaaggagggagcttcattatagaatttccatgcataca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tttcagcataagttaatcctaccaaggagggagcttcattatagaatttccatgcataca 226

                                                                       
Query: 361 tttggaagatactagtgcaaattctgagagagagggagagggagagggagagggagaggg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 tttggaagatactagtgcaaattctgagagagagggagagggagagggagagggagaggg 166

                      
Query: 421 agagggagagg 431
           |||||||||||
Sbjct: 165 agagggagagg 155


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 22
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 22
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 832
Length adjustment: 9
Effective length of query: 423
Effective length of database: 823
Effective search space:   348129
Effective search space used:   348129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)