Query= MSMg01no480_a22.b1 MSMg01no480_a22.b1 CHROMAT_FILE:
MSMg01no480_a22.b1 PHD_FILE: MSMg01no480_a22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:15 2005
(607 letters)
>mm_chr18_89390175_89391181
Length = 1007
Score = 1151 bits (595), Expect = 0.0
Identities = 601/603 (99%)
Strand = Plus / Plus
Query: 5 gaattcaaactaaattcaaaatagagcaaaaactcaggaggaaataactatttaggaaaa 64
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaactaaaaccaaaatagagcaaaaactcaggaggaaataactatttaggaaaa 264
Query: 65 caggactaataagattatcatggcaataacttatgtcatttatcaaatgcagtttggaac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caggactaataagattatcatggcaataacttatgtcatttatcaaatgcagtttggaac 324
Query: 125 ataaaaatgtcatttgatgtatagttacttcatttggctaatgaggagacaactcactga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ataaaaatgtcatttgatgtatagttacttcatttggctaatgaggagacaactcactga 384
Query: 185 agttcatttccagagataatgaaaaacgcataatcatgatagaagtggttcttcactgtt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agttcatttccagagataatgaaaaacgcataatcatgatagaagtggttcttcactgtt 444
Query: 245 tacatcaggcacatgatgtcttgtccacttcactcctggagtgtgtgattgttggcctat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tacatcaggcacatgatgtcttgtccacttcactcctggagtgtgtgattgttggcctat 504
Query: 305 tagtgacaggccctaggagagttgtaatgtctgtgcccatctttgagtagaaagctgttg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tagtgacaggccctaggagagttgtaatgtctgtgcccatctttgagtagaaagctgttg 564
Query: 365 cttctctggagccaatcaacaggacatgctaaattctgacagaaatgctgtagtggaagc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cttctctggagccaatcaacaggacatgctaaattctgacagaaatgctgtagtggaagc 624
Query: 425 tatagctttgagtccagaggaggtacctcagaagttcatatgtgatattatcaggatgta 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tatagctttgagtccagaggaggtacctcagaagttcatatgtgatattatcaggatgta 684
Query: 485 tgcagaattccaagatttcagcagaaagaattgtctgcatgagggcatgaagtgagtgag 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tgcagaattccaagatttcagcagaaagaattgtctgcatgagggcatgaagtgagtgag 744
Query: 545 gattatgaacacatgatgggcttaagtataataactgtgattataaactataggcatgtg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gattatgaacacatgatgggcttaagtataataactgtgattataaactataggcatgtg 804
Query: 605 tgg 607
|||
Sbjct: 805 tgg 807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space: 595209
Effective search space used: 595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no480_a22.g1 MSMg01no480_a22.g1 CHROMAT_FILE:
MSMg01no480_a22.g1 PHD_FILE: MSMg01no480_a22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:15 2005
(579 letters)
>mm_chr18_89490308_89491286
Length = 979
Score = 996 bits (515), Expect = 0.0
Identities = 533/539 (98%), Gaps = 1/539 (0%)
Strand = Plus / Minus
Query: 1 tctcagttgaagttttctcctctcaaataactctaatttgtgtaaagttgacataaaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 tctcagttgaagttttctcctctcaaataactctaatttgtgtaaagttgacataaaact 479
Query: 61 agccagcacatcagttttgaaaacaagctccttcacctaatgggccattttgtcagccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 agccagcacatcagttttgaaaacaagctccttcacctaatgggccattttgtcagccct 419
Query: 121 ttattttgttttctgagatcaagtctctctaagtgaaccagacaggtcttcagtcccttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ttattttgttttctgagatcaagtctctctaagtgaaccagacaggtcttcagtcccttc 359
Query: 181 ttctaaatgaattcctgaaggaaattagcttggtgagaactaaagttcagatgactgtaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ttctaaatgaattcctgaaggaaattagcttggtgagaactaaagttcagatgactgtaa 299
Query: 241 gacagatattgttaaaagaaagggtacaagcctgaccaatacagatgcagatgcatgcag 300
|||||| | || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gacagaaactggaaaaagaaagggtacaagcctgaccaatacagatgcagatgcatgcag 239
Query: 301 ccaaacattgaactgagcacagagaacccaatggcgaatttaggtcaaggactgaaggag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 ccaaacattgaactgagcacagagaacccaatggcgaatttaggtcaaggactgaaggag 179
Query: 361 ctgaagggatttgaaaactcataggaagaacagcaatatcaaccaaccagacaccccccc 420
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 178 ctgaagggatttgaaaactcatagaaagaacagcaatatcaaccaaccagacaccccccc 119
Query: 421 cacccccacccccgcaaagctcctggggactaaaccaccaaccaaagagtacagatgtgg 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 -acccccacccccgcaaagctcctggggactaaaccaccaaccaaagagtacagatgtgg 60
Query: 481 gaacccatggctccaactggatatgtagcagaggattgccttatcgggcatcattggga 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 gaacccatggctccaactggatatgtagcagaggattgccttatcgggcatcattggga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space: 551361
Effective search space used: 551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
