XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTT
GTTTAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTTCTGAAGT
CCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCTATCTGAT
TTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTTTTTGTCTT
ATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTAGGTCCC
ATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTCTGTTCAGG
AATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACTTTCTCCTC
TATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGATCCACTTAG
ATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCGCATTCTTCTA
CACGATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAATGCTGTCTTT
CTTCCACTGGATGGTTTTATCTCCCTTGTCGAAGATCAAGTGACCATAGG
TGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGTCTACTTGT
CTGTCTCTATACCAGTACCATGCAGTTTTTATCACAATTGCTCTGTAGTA
AAGCTTTAGGTCTGGCATGGTGATTCCGCCAGAAGTTATTTTATCCTTGA
GAAGACTTTTTGCTATCCTAGGTTTTTTGTTA

CGATGCTGTGNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCATAGGCGTTTCTTACAAGGATTCCTT
AGCCTATGTATAGTCTCTCTGAGAAACGGAGGGGAAGAATGGAGGGGAGA
AACGGAGGGCATGGTCTCAACTCAGTGCTTCAGATCTGAGATTTATTGCT
CTGTGGCTTTCTGAAACCAGATAAGAAAGGTTATGCTAAGTGGAGTTACA
GGAAAAGTGAAAAGGAAGTTAAAGGATTGGTTTGGAATAGAATTGGAGAT
TAAGGGTTAATTTTTTCCCTTGGATGGTGAAATTCGGTACTAATGCTCAA
AACTAGCCAACCAAGCGAAGCAGAGCTGACTCAGCATGATTGAGGTGGAT
TCCATCCTCTTTGGTTCGATTCAAAGTAAAATTGGAGTAACCTTGAGATT
AAAAGAATAATAGTGGCAATAGTCCTTTTCTTGACAATGGTCATTTTCTC
TGTGGAAGTCTCACTGTATCCTGTGAGGCAGTACATGGGTGAATTTAATA
CAATAAACGGAGATAGAGATTGATGTGCCATCTATGCTTTACTGATTATA
TTTATAAAACAGACGATAAATGAATTGTTCCGAGTATTTTTTAGTATCCT
TAGAGGTTGAAACATTTTCTGTATCACAGTGATTTTAGTTAGTGCATAGC
AAGGTGTTTGGAAGAACAAGAACGGTGGGAATTAAAAATTGTGTACAGAT
TGTGCG

Query= MSMg01no482_e17.g1 MSMg01no482_e17.g1 CHROMAT_FILE:
MSMg01no482_e17.g1 PHD_FILE: MSMg01no482_e17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:10 2005
         (625 letters)



>mm_chr18_59951191_59952216
          Length = 1026

 Score = 1133 bits (586), Expect = 0.0
 Identities = 616/626 (98%), Gaps = 1/626 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cataggcgtttcttacaaggattccttagcctatgtatagtctctctgagaaacggaggg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 cataggcgtttcttacaaggattccttagcctatgtatagtctctctgagaaacggaggg 767

                                                                       
Query: 61  gaag-aatggaggggagaaacggagggcatggtctcaactcagtgcttcagatctgagat 119
           | || || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 ggagaaacggaggggagaaacggagggcatggtctcaactcagtgcttcagatctgagat 707

                                                                       
Query: 120 ttattgctctgtggctttctgaaaccagataagaaaggttatgctaagtggagttacagg 179
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 gtattgctctgtggctttctgaaaccagataagaaaggttatgctaagtggagttacagg 647

                                                                       
Query: 180 aaaagtgaaaaggaagttaaaggattggtttggaatagaattggagattaagggttaatt 239
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 646 aaaagtgaaaaggaagttaaaggattggtttggaatagaattggagattaagggataatt 587

                                                                       
Query: 240 ttttcccttggatggtgaaattcggtactaatgctcaaaactagccaaccaagcgaagca 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 ttttcccttggatggtgaaattcggtactaatgctcaaaactagccaaccaagcgaagca 527

                                                                       
Query: 300 gagctgactcagcatgattgaggtggattccatcctctttggttcgattcaaagtaaaat 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 gagctgactcagcatgattgaggtggattccatcctctttggttcgattcaaagtaaaat 467

                                                                       
Query: 360 tggagtaaccttgagattaaaagaataatagtggcaatagtccttttcttgacaatggtc 419
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tgaagtaaccttgagattaaaagaataatagtggcaatagtccttttcttgacaatggtc 407

                                                                       
Query: 420 attttctctgtggaagtctcactgtatcctgtgaggcagtacatgggtgaatttaataca 479
           |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 406 attttctctgtggaagtctcgctgtatcctgtgaggcaatacatgggtgaatttaataca 347

                                                                       
Query: 480 ataaacggagatagagattgatgtgccatctatgctttactgattatatttataaaacag 539
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ataaacggatatagagattgatgtgccatctatgctttactgattatatttataaaacag 287

                                                                       
Query: 540 acgataaatgaattgttccgagtattttttagtatccttagaggttgaaacattttctgt 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 acgataaatgaattgttccgagtattttttagtatccttagaggttgaaacattttctgt 227

                                     
Query: 600 atcacagtgattttagttagtgcata 625
           | ||||||||||||||||||||||||
Sbjct: 226 accacagtgattttagttagtgcata 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1026
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1016
Effective search space:   624840
Effective search space used:   624840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)