CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGGTACTGATCCGCGGA
ATTCGACNTTAAGCTAAAAAATTTTTTTTAATCTATTTATCTTCCTGAAC
ACATTACTTAGCTCTATTCTACTTCCTGGTGCAATTTTCTACTGAAATTA
TACATTTTGTACTTTTCCTTCCTCAGCTTGCTCCTCTTCATTATAAATCT
GCATAAGGGTTGACAGTACTAACCATATGACAGAGTCATTACTAAGCTGT
TCTTAAAATCTTCTATGCTAATGCCATATTTTGGACAAGAAGAGAAAACA
GATACTTACTTCACAATTTTTATTTTAAAAAAAGTCTCTAGTCCACATAT
AAATGTTCTTTTTCTCTGAAACTTCATGAGGCAGGTATCCACAGTTCAAA
TCACCCTCAGTACAACTGGCATCCATGCTCCTATTTGTATGGCCCATTAA
TCAAGGCTTAAAGCACTCTACTGCTTCCCTATACCAAAGCTCCAAAGTTC
ACATTCATCCAAACAAAAGTATGTTTAGGCCTATCAGAGCAATATCCCAC
TCCTGGTATTAACTTCTGCGTCTATGTTATAGTTATAGGTTAAGTCCAAT
ATCATCATGGTGTGAAGCATGGTGACAGGCCAGCACACATGGTACTGAAA
AGGTAACTGAACATTCTACATCTGGATTCACAGACAACAGGTAGAAGAAC
TGAGAGCCACTTGTCTGGCTTGATCATCTGAGACCTAAAAACCTAA

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCATTTACAGCTGGCAAAAAAGAAAA
GTGCATTTCAAAAGAAAAGAAAACACCCACACCTCCACAACCCTCCCCCA
CTATTTGAAAAGCCAATCCCTACTGTCAGGGGGCATCAGGAGAATGTGAT
AACTAGTCTTTGGAAAGGTCTTGGGCCTTCATAAACCTCCCAATCAGAGT
TCAGCTTTCCACGAAGACCACAAGAGAACAGGTTGTACAGTGTACAATAC
GAAATCTGGAAAGGGGAAGGGAGATGGAGGTGGGACAATAGCTTTTGTAA
GGCAAATCTCCCCTTCCACATTAGCTTATATTTTATTTAAAGTCCAAATC
ACTGGTGACATGGCTCAGCTTGTCAAGCGTCTTGTCACACACACCTGGTA
ACCTGAATTTAGTACTCTGGACCCATGGTACAATAGAGAATGAACATCCC
ACATTTATCCTGAGATCTCCTTGTGCATTCTGTGGCATATGCCTTCCTCA
ATTAATAAACAATTGCCTATTAAAAAGTAGTGCATGGGCCTTGCTGCCCT
CGTTTATTAGCAGAATTTGAAAACAGGCATAATAGATAAGTCAATAGATT
TGAAAAGTATGAAAAGTGAAAAAAACGCTGTTATTCTTTTAATCTTTGAG
AATGACACTATTTCTGGAGAAAGTTATTAATACAAAAATTGT

Query= MSMg01no482_n05.g1 MSMg01no482_n05.g1 CHROMAT_FILE:
MSMg01no482_n05.g1 PHD_FILE: MSMg01no482_n05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:49 2005
         (614 letters)



>mm_chr18_87188235_87189247
          Length = 1013

 Score = 1141 bits (590), Expect = 0.0
 Identities = 608/614 (99%), Gaps = 1/614 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atttacagctggcaaaaaagaaaagtgcatttcaaaagaaaagaaaacacccacacctcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 atttacagctggcaaaaaagaaaagtgcatttcaaaagaaaagaaaacacccacaccccc 260

                                                                       
Query: 61  acaaccctcccccactatttgaaaagccaatccctactgtcagggggcatcaggagaatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaaccctcccccactatttgaaaagccaatccctactgtcagggggcatcaggagaatg 320

                                                                       
Query: 121 tgataactagtctttggaaaggtcttgggccttcataaacctcccaatcagagttcagct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgataactagtctttggaaaggtcttgggccttcataaacctcccaatcagagttcagct 380

                                                                       
Query: 181 ttccacgaagaccacaagagaacaggttgtacagtgtacaatacgaaatctggaaagggg 240
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttccacgaagaccacaagagaagaggttgtacagtgtacaatacgaaatctggaaagggg 440

                                                                       
Query: 241 aagggagatggaggtgggacaatagcttttgtaaggcaaatctccccttccacattagct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagggagatggaggtgggacaatagcttttgtaaggcaaatctccccttccacattagct 500

                                                                       
Query: 301 tatattttatttaaagtccaaatcactggtgacatggctcagcttgtcaagcgtcttgtc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 501 tatattttatttaaagtccaaatcactggtgacatggctcagcttgtcaagtgtcttgtc 560

                                                                       
Query: 361 acacacacctggtaacctgaatttagtactctggacccatggtacaatagagaatgaaca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acacacacctggtaacctgaatttagtactctggacccatggtacaatagagaatgaaca 620

                                                                       
Query: 421 tcccacatttatcctgagatctccttgtgcattctgtggcatatgccttcctcaattaat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcccacatttatcctgagatctccttgtgcattctgtggcatatgccttcctcaattaat 680

                                                                       
Query: 481 aaacaattgcctattaaaaagtagtgcatgggccttgctgccctcgtttattagcagaat 540
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 681 aaacaattgcctattaaaaagtagtgcatgagccttgctgccctcgtttattagcagaat 740

                                                                       
Query: 541 ttgaaaacaggcataatagataagtcaatagatttgaaaagtatgaaaagtgaaaaaaac 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct: 741 ttgaaaacaggcataatagataagtcaatagatttgaaaagtatgaaaagttaaaaaa-c 799

                         
Query: 601 gctgttattctttt 614
           ||||||||||||||
Sbjct: 800 gctgttattctttt 813


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1013
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1003
Effective search space:   605812
Effective search space used:   605812
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)