NNNNAACTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTCTGTTCAGTTCTGTGCACCATTTTTAAATTGGGTTATT
TGGTTTGTTGGAGTTTAACTTCTTTAGTTCTTCATATATTTTGGAATTTA
CCTCTCTGTTGGTTGTAGGGTTAGTGAAGATCTTTTCCCAATCTGTAGGT
TGCCATTTTGTCCTGTTGACAGTGTCCTTTGCCTTACAGAAGCTTTGCAA
TTTCATGAGGTCCCATTTATCATTTGTTGATCTTAGGGCCTGAGCCACTG
GTGTTCTGTTCAGGAAATTTTCTCCTGTACCAATTCGTTCAAAGCTCTTT
CCCACTTTCTCTTTTGTTAGGCATCCAGTTTTGTGTTGAGGTCCTTGATT
CAAGTGGGCTTGAGTTTTGGGCAGGGTGACTATATGGATTTATTTGCATT
TTTCTACATGCAGACATCCAATTAAACTAGCACCATTTGTTGAAGATGCT
TTCTTTTTTCCATTGTATGGTTTTAGCTTCTCTGTCAAAATTCAAATGTT
CATAGGTGTGTGGGTTTTTTTTTTTCTTTTTCTATTTCATTGATTTATTT
CATTGATCTATCCCTGTCTGTCTCTGTACCAATACCATGCAGTTATTAAT
TAATTAATTAATTAATTAATTAATTTTAAATCACTTGCTCTGTAGTACAG
CAGGAAGTCTGGGATGGTGGGATGGTGATTATTCCTTCGAGGTTCTTTTT
ATGTTCANGATTTTTTTT

NNNTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTTTGCTAATCCAAAGTACTA
TAAACATTTATATGTTAAATAAAGGCAATTGTCTTCTTGCATGGGCCTTA
TTTTCCCAAATTTTGAACAGTGGCTCACAAAAAAAAAAAAAAAAAAAAAA
CTAACTTAATGACAAAAGAGCAAAAGAGACGAGATGTAAATTTTACTGTC
TTCCTTATCTTATATGTTAACCCAAGGAAATAACAGCTGAATTCAGTACT
AAAGGGATATTAAAACATAATGAAAATATGCATGAAGTATAACTATTTGC
TAATCTAGATTTGACTTACATAAATAATGTAAGCACCAGTACTTTTATTT
TCCATTTAATAGGCTATACAAGGATTAGGAAGGGTGAAATGTACACCTTA
TAGCTAACATTGTTCTGAACCTGATACAAGCAAAACTCACAATCTCACCT
AGCCTAAAATAGTATGTCAATTTCCAGCCTTTCTAAATAAAACAAAGGGG
ACAGATGGCCAGCAGAAAATATTAACTTCCTACCTTACAGACAAATTCAA
AGACAATTATGTATAGATTAACAGAATCCTCTTTCAAGTTCAGCATGCAC
TTTTTTTCTGAGTTTCCTGCTATTTATCATCTCATAAAAGCTGCAAGAAA
ATCAAAATCCATTCAAGCTTTTTAGTATATGAGTGAAAAACACGTTCCTA
ACCTCACGATTGCCTG

Query= MSMg01no483_c11.g1 MSMg01no483_c11.g1 CHROMAT_FILE:
MSMg01no483_c11.g1 PHD_FILE: MSMg01no483_c11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:15 2005
         (483 letters)



>mm_chr18_56318983_56319860
          Length = 878

 Score =  818 bits (423), Expect = 0.0
 Identities = 463/481 (96%), Gaps = 10/481 (2%)
 Strand = Plus / Plus

                                                                       
Query: 3   ttgctaatccaaagtactataaacatttatatgttaaataaaggcaattgtcttcttgca 62
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 208 ttgctaatccaaagtactataaacatttatatgctaaataaaggcaattgtcttcttgca 267

                                                                       
Query: 63  tgggccttattttcccaaattttgaacagtggctcacaaaaaaaaaaaaaaaaaaaaaac 122
           |||||||||||||||||||||||||||||||||     ||||||||||||||||||||||
Sbjct: 268 tgggccttattttcccaaattttgaacagtggc-----aaaaaaaaaaaaaaaaaaaaac 322

                                                                       
Query: 123 taacttaatgacaaaagagcaaaagagacgagatgtaaattttactgtcttccttatctt 182
           ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 323 taacttaatgacaaatgagcaaaagagatgagatgtaaattttactgtcttccttatctt 382

                                                                       
Query: 183 atatgttaacccaaggaaataacagctgaattcagtactaaagggatattaaaacataat 242
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 383 atatgttaacccaaggaaataacagctgagttcagtactaaagggatattaaaacataat 442

                                                                       
Query: 243 gaaaatatgcatgaagtataactatttgctaatctagatttgacttacataaataatgta 302
           |||||||||||| ||||    |||| ||||||||||||||||||||||||||||||||||
Sbjct: 443 gaaaatatgcataaagt----ctatgtgctaatctagatttgacttacataaataatgta 498

                                                                       
Query: 303 agcaccagtacttttattttccatttaataggctatacaaggattaggaagggtgaaatg 362
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 499 agcaccagtacttttattttccacttaataggctatacaaggattaggaagggtgaaatg 558

                                                                       
Query: 363 tacaccttatagctaacattgttctgaacctgatacaagcaaaactcacaatctcaccta 422
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tacacct-atagctaacattgttctgaacctgatacaagcaaaactcacaatctcaccta 617

                                                                       
Query: 423 gcctaaaatagtatgtcaatttccagcctttctaaataaaacaaaggggacagatggcca 482
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 gcctaatatagtatgtcaatttccagcctttctaaataaaacaaaggggacagatggcca 677

            
Query: 483 g 483
           |
Sbjct: 678 g 678


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 483
Length of database: 878
Length adjustment: 10
Effective length of query: 473
Effective length of database: 868
Effective search space:   410564
Effective search space used:   410564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)