CCCCTATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGAGGA
GCCGCGGAATTCAAGGCTCACACCTAAACGTGATAAAAGCAATCTACAGC
AAACCAGTAGCCAACATCAAAGTAAATGGAGAGAAGCTGGAAGCAATCCC
ACTAAAATCAGGGACTAGACAAGGCTGCCCACTTTCTCCCTACCTTTTCA
ACATAGTACTTGAAGTATTAGCCAGAGCAATTTGACAACAAAAGGAGATC
AAGGGGATACAAATTGGAAAGGAGGATGTCAAAATATCACTTTTTGCAGA
TGATATGATAGTATATATAAGTGACCCTAAAAATTCCACCAGAGAACTCC
TAAACCTGATAAACAGCTTCGGTAAAGTAGCTGGATATAAAATTAACTCA
AACAAGTCAATGGCCTTTCTCTACACAAAGAATAAACAGGCTGAGAAAGA
AATTAGGGAAACAACACCCTTCTCAATAGTCACAAATAATATAAAATATC
TCGGAGTGACTCTAACTAAGGAAGTGAAAGATCTGTATGATAAAAACTTC
AAGTCTCTGAAGAAAGAAATTAAAGAAGATCTCAGAAGATGGAAAGATCT
CCCATGCTCATGGATTGGCAGGATCAACATTGTAAAAATGGCTATCTTGC
CAAAAGCAATCTACAGATTCAATGCAATCCCCATCAAAATTCCAACTCAA
TTCTTCAACAAATTAGAAGGAGCAATTTGCAAATTCATCTGGAA

CCCCCCGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTCTGTCTGTGTTTCACA
CCTCTAATCCCAATACCTAGAGGCAGAAGCAGAAGAATCAATGTAAGTGC
AAGGCCAGCCTGGTCTACAGAGCTGTTTCCTGGGCAGCCACAGCTAGATA
GCAAGATTCTGAGTCAAAACCAGAAAGTTAAAAGATAAAAATTAAACAAG
AAAACAAAAATACTTGAGTTGTGATTATTTTAATAGTCCCCAACAAGATA
AATATACAAATATCATTTTTCTTTTATTCTTCACTCATATAATTTGTCCC
AACCACAGTCTCACCTCCCCTACTCCTCCCAGTTCCTCACACCAAATGAC
ATTTTCAAACCCCAATAAAAATTATATACAAATAAAAACCTTAATGTTAT
TTTATTTGCAAAGGATAAAGGACATGACACACAAAATACAACATCAGAAA
GGATGCAAAACTGCTATTCTGGCAGCAATCATGCAGAAAGCATTAGTCAG
GAATGAAGATTGCATAGATTCAGAGTTGGATTCTATGAAAATTCTAAAAG
GTTTATTTATGAAATTCAATGAGCTAACTTCACAATTTTCATGGAAATAT
AAATTAACAAGAATCTATGCCGTGAACTCGACATAAACTAAAAGACTTCC
ATTAGATGATGTCAAAATCCCTCTTTACCCCATACTAATTTATTA

Query= MSMg01no484_o02.g1 MSMg01no484_o02.g1 CHROMAT_FILE:
MSMg01no484_o02.g1 PHD_FILE: MSMg01no484_o02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:36 2005
         (547 letters)



>mm_chr18_50966142_50967088
          Length = 947

 Score = 1035 bits (535), Expect = 0.0
 Identities = 541/543 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gtctgtgtttcacacctctaatcccaatacctagaggcagaagcagaagaatcaatgtaa 64
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 205 gtctgtgtttcacacctctaatcccaatacctagaggcagaagcagaagaatcactgtaa 264

                                                                       
Query: 65  gtgcaaggccagcctggtctacagagctgtttcctgggcagccacagctagatagcaaga 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtgcaaggccagcctggtctacagagctgtttcctgggcagccacagctagatagcaaga 324

                                                                       
Query: 125 ttctgagtcaaaaccagaaagttaaaagataaaaattaaacaagaaaacaaaaatacttg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttctgagtcaaaaccagaaagttaaaagataaaaattaaacaagaaaacaaaaatacttg 384

                                                                       
Query: 185 agttgtgattattttaatagtccccaacaagataaatatacaaatatcatttttctttta 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agttgtgattattttaatagtccccaacaagataaatatacaaatatcatttttctttta 444

                                                                       
Query: 245 ttcttcactcatataatttgtcccaaccacagtctcacctcccctactcctcccagttcc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttcttcactcatataatttgtcccaaccacagtctcacctcccctactcctcccagttcc 504

                                                                       
Query: 305 tcacaccaaatgacattttcaaaccccaataaaaattatatacaaataaaaaccttaatg 364
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tcacaccaaataacattttcaaaccccaataaaaattatatacaaataaaaaccttaatg 564

                                                                       
Query: 365 ttattttatttgcaaaggataaaggacatgacacacaaaatacaacatcagaaaggatgc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttattttatttgcaaaggataaaggacatgacacacaaaatacaacatcagaaaggatgc 624

                                                                       
Query: 425 aaaactgctattctggcagcaatcatgcagaaagcattagtcaggaatgaagattgcata 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aaaactgctattctggcagcaatcatgcagaaagcattagtcaggaatgaagattgcata 684

                                                                       
Query: 485 gattcagagttggattctatgaaaattctaaaaggtttatttatgaaattcaatgagcta 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gattcagagttggattctatgaaaattctaaaaggtttatttatgaaattcaatgagcta 744

              
Query: 545 act 547
           |||
Sbjct: 745 act 747


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space:   503169
Effective search space used:   503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)